CAZyme Information: MGYG000004469_00490

Basic Information

• Species: Alistipes_A sp900545315
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes_A; Alistipes_A sp900545315
• CAZyme ID: MGYG000004469_00490
• CAZy Family: PL35
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
618		69922.85	5.6763

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004469	2457179	MAG	Israel	Asia

• Gene Location: Start: 30514; End: 32370 Strand: +

Full Sequence      

MKLLLTCIATLLAFVATPTFAQVDLDQIAPHPRLMLPKGAEKQLLKQIKKDSVWRNIHAL
TLQEADRIVTLPVNERIKTGMRLLAISLENLRRVFVLSYAYRMTGEEKYFKRAEAEMLKA
ASFSDWNPSHFLDVGEMTMALGIGYDWLYPNLSESSRKTIREAIINKGFVPSYDTAYNWF
LDAEHNWNQVCNGGLTFGAIAIADEAPEWSQKILDRATDRVRLPMRNYAPDGGYPEGASY
WGYGTLFNVLMINGLETAFGTDYGLKEMPGFMQTGTFAMQMISPLGLQFNFMDNSELPEE
SPALFWFYNQTQDPALLCNQIALMKQDSTHKFLNNRVLPAIIIWGAGAPMENPVQPTQTY
WIGAGHTPLCVMRSAWGDPKARFVGVKMGSPSINHGHMDVGSFVFEADSVRWALDLGRED
YNDTETLGVDLWTMTQESQRWDVFKYNNFAHNTLTFNDKHQYIKGSAPIIDSSSNPQQPY
VATDLTPVYAGQVQKVERAYSLVDNDYLVIEDKVTAGPHYTRMRWTLATKAKPTLVSSNL
VLLEQDGKKCYLKVDSETPIKWYFEKTPTVNTYDTPCPDVTMVVFDTDLKRNETQKFTVM
MLPGSAERATDGFTPVLK

Enzyme Prediction     

No EC number prediction in MGYG000004469_00490.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL35	380	557	1.1e-63	0.9776536312849162

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	2.42e-09	17	240	123	362	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	2.74e-08	395	565	39	207	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCG53903.1	0.0	1	614	1	615
QUT50613.1	4.09e-242	27	610	31	614
QGA22620.1	4.55e-241	23	617	27	618
AXY73442.1	4.11e-199	2	616	4	623
ARK12523.1	3.21e-198	27	606	33	612

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A0O_A	1.28e-13	72	533	189	665	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	2.04e-12	72	533	189	665	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000220	0.999153	0.000163	0.000157	0.000155	0.000139

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004469_00490.