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CAZyme Information: MGYG000004479_00137

You are here: Home > Sequence: MGYG000004479_00137

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola mediterraneensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola mediterraneensis
CAZyme ID MGYG000004479_00137
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
395 MGYG000004479_2|CGC2 44782.7 8.9137
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004479 3712458 MAG Israel Asia
Gene Location Start: 16501;  End: 17688  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004479_00137.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 48 394 1.7e-111 0.9971830985915493

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07075 DUF1343 2.09e-168 50 394 2 362
Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876 YbbC 1.97e-84 27 394 24 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AND21653.1 2.33e-184 15 395 8 386
QJR69303.1 6.66e-184 15 395 8 386
QJR54332.1 6.66e-184 15 395 8 386
QJR60869.1 6.66e-184 15 395 8 386
QJR65038.1 6.66e-184 15 395 8 386

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4JJA_A 9.89e-107 26 395 3 369
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]
4K05_A 1.97e-60 21 395 5 399
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 3.43e-70 36 394 41 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000607 0.998677 0.000223 0.000170 0.000152 0.000145

TMHMM  Annotations      download full data without filtering help

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