logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004479_00692

You are here: Home > Sequence: MGYG000004479_00692

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola mediterraneensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola mediterraneensis
CAZyme ID MGYG000004479_00692
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
721 MGYG000004479_6|CGC1 80304.56 4.0839
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004479 3712458 MAG Israel Asia
Gene Location Start: 30124;  End: 32289  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 442 702 1.7e-39 0.6831683168316832

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 2.42e-27 444 703 96 310
Glycosyl hydrolase family 10.
smart00633 Glyco_10 3.66e-26 444 701 54 263
Glycosyl hydrolase family 10.
COG3693 XynA 8.23e-17 451 708 126 344
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 3.95e-11 53 135 3 85
Glycosyl hydrolase family 10.
COG3693 XynA 6.83e-06 78 149 51 121
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRQ48288.1 4.34e-281 11 708 13 719
QUT46089.1 4.06e-279 11 708 13 719
QIU93949.1 1.76e-222 7 712 8 732
QDM11106.1 3.89e-221 7 705 8 725
QGT73069.1 3.24e-220 7 712 8 732

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MGS_A 6.77e-16 186 289 43 150
BiXyn10ACBM1 APO [Bacteroides intestinalis DSM 17393]
4QPW_A 1.03e-15 186 287 37 142
BiXyn10ACBM1 with Xylohexaose Bound [Bacteroides intestinalis DSM 17393]
4XUY_A 2.58e-10 445 705 102 302
Crystalstructure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88],4XUY_B Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88]
2F8Q_A 1.48e-07 431 620 100 263
Analkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27 [Bacillus sp. NG-27],2F8Q_B An alkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27 [Bacillus sp. NG-27]
2FGL_A 1.49e-07 431 620 101 264
Analkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27 [Bacillus sp. NG-27],2FGL_B An alkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27 [Bacillus sp. NG-27]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O94163 1.22e-12 445 705 125 327
Endo-1,4-beta-xylanase F1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF1 PE=1 SV=1
Q96VB6 1.62e-11 445 705 123 323
Endo-1,4-beta-xylanase F3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF3 PE=1 SV=1
O59859 5.37e-11 393 705 77 327
Endo-1,4-beta-xylanase OS=Aspergillus aculeatus OX=5053 GN=xynIA PE=3 SV=1
Q4P902 1.10e-10 448 698 139 332
Endo-1,4-beta-xylanase UM03411 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=UMAG_03411 PE=1 SV=1
Q4JHP5 1.70e-10 445 705 126 326
Probable endo-1,4-beta-xylanase C OS=Aspergillus terreus OX=33178 GN=xlnC PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000066 0.021057 0.978882 0.000008 0.000012 0.000011

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004479_00692.