CAZyme Information: MGYG000004479_00693

Basic Information

• Species: Phocaeicola mediterraneensis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola mediterraneensis
• CAZyme ID: MGYG000004479_00693
• CAZy Family: GH115
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
813	MGYG000004479_6|CGC1	93374.55	5.614

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004479	3712458	MAG	Israel	Asia

• Gene Location: Start: 32607; End: 35048 Strand: +

Full Sequence      

MVCNETAVNILIDEKDQKGISLAVENLQGDFNAVFGLKPHLLTEASGGNCIIIGSLNSCY
IQQLVKKKKLDDKELQGKNEKYILTTVEKPLEGIEKALVIAGSDRRGTIYGIYELSKQIG
VSPWYWWMDVPVVKRTEAYVLPGMFTDGEPAVKYRGIFLNDEAPCLTSWVKQYFGTDFGN
HHFYAQVCELILRLKGNFLWPAMWGWAFYVDDPLNSKTADEMGVIIGTSHHEPMARNHQE
WARKRKEYGAWNYATNKEVLDNFFREGIERVKGTEDVITIGMRGDGDEAMSEDTNVKLME
SIVENQRKIIKDVTGKSADKTPQVWALYKEVLDYYDKGMRVPDDVIMLLCDDNWGNVRRL
PDEKERKHPGGWGMYYHVDYVGAPRNSKWMNMTPIQGMWEQLHLTYEYGVDKLWILNVGD
LKPMEYPITLFMDMAWNPQGYTVDNFMKHPHEFCAQVFGEAQAEEAARILNLYSKYNGRV
TAEMLDYKTYNLETGEWKRVADDYARLEAEALRQYLSLSPEYRDAYKQLLLFPVQAMSNL
YEMYYAQAMNHKLYADGNPEANDWADKVEACFARDKALSEDYNHIMSKGKWEGMMTQKHI
GYTSWNDDFPADKLPEIFRLPAVERNAGGYVFTEKDGYVAIEAEHFFEKKSSEGMDWKVI
PDMGRTLSGVTLMPYTKPVKGATLSYKMTLSEKMKQLKQVRVIVVVKSTLAFQDVKGHKY
SVGFRGGNKVTVNFNRDLNELPENIYDKFYPTVARRVVEKEVILELPASNGNTFILDFSP
LNPAIVFEKIVIDGGGYENSYLYMNESSCKRVK

Enzyme Prediction     

EC	3.2.1.131

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH115	2	790	6.3e-279	0.9899569583931134

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam15979	Glyco_hydro_115	0.0	148	484	1	334	Glycosyl hydrolase family 115. Glyco_hydro_115 is a family of glycoside hydrolases likely to have the activity of xylan a-1,2-glucuronidase, EC:3.2.1.131, or a-(4-O-methyl)-glucuronidase EC:3.2.1.-.
pfam17829	GH115_C	1.22e-35	631	802	1	168	Gylcosyl hydrolase family 115 C-terminal domain. This domain is found at the C-terminus of glycosyl hydrolase family 115 proteins. This domain has a beta-sandwich fold.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
EDY95690.1	0.0	1	813	35	845
QUR44901.1	0.0	1	811	35	842
CBK67960.1	0.0	1	811	46	853
QUT32427.1	0.0	1	811	35	842
QRM99002.1	0.0	1	811	35	842

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4C90_A	0.0	1	811	46	853	Evidencethat GH115 alpha-glucuronidase activity is dependent on conformational flexibility [Bacteroides ovatus],4C90_B Evidence that GH115 alpha-glucuronidase activity is dependent on conformational flexibility [Bacteroides ovatus],4C91_A Evidence that GH115 alpha-glucuronidase activity is dependent on conformational flexibility [Bacteroides ovatus],4C91_B Evidence that GH115 alpha-glucuronidase activity is dependent on conformational flexibility [Bacteroides ovatus]
7PUG_A	0.0	6	813	24	840	ChainA, xylan alpha-1,2-glucuronidase [uncultured bacterium]
7PXQ_A	0.0	6	813	23	839	ChainA, xylan alpha-1,2-glucuronidase [uncultured bacterium]
4ZMH_A	2.97e-192	5	634	20	647	Crystalstructure of a five-domain GH115 alpha-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T [Saccharophagus degradans 2-40],4ZMH_B Crystal structure of a five-domain GH115 alpha-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T [Saccharophagus degradans 2-40]
6NPS_A	1.26e-123	13	608	25	648	Crystalstructure of GH115 enzyme AxyAgu115A from Amphibacillus xylanus [Amphibacillus xylanus NBRC 15112],6NPS_B Crystal structure of GH115 enzyme AxyAgu115A from Amphibacillus xylanus [Amphibacillus xylanus NBRC 15112]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000072	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004479_00693.