logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004491_02283

You are here: Home > Sequence: MGYG000004491_02283

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900548745
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900548745
CAZyme ID MGYG000004491_02283
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
613 66556.05 6.3231
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004491 3066074 MAG Israel Asia
Gene Location Start: 2820;  End: 4661  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004491_02283.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 82 268 1.1e-76 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 2.23e-07 84 226 3 151
Amb_all domain.
COG3866 PelB 6.58e-05 72 226 72 236
Pectate lyase [Carbohydrate transport and metabolism].
pfam00544 Pec_lyase_C 0.002 121 225 59 175
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD39200.1 3.02e-201 23 570 18 578
QCP72891.1 3.02e-201 23 570 18 578
QUT77823.1 4.11e-182 26 555 48 524
QUT75603.1 6.39e-182 22 557 8 496
QUT93111.1 1.10e-170 26 546 40 511

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.53e-41 26 546 17 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 4.42e-40 26 546 17 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297 1.21e-36 26 548 17 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B0XMA2 1.06e-35 25 546 17 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 1.45e-35 25 546 17 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000295 0.999007 0.000151 0.000204 0.000167 0.000154

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004491_02283.