CAZyme Information: MGYG000004495_01429

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella
• CAZyme ID: MGYG000004495_01429
• CAZy Family: CBM50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
465	MGYG000004495_21|CGC1	52632.17	9.3404

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004495	2923471	MAG	Israel	Asia

• Gene Location: Start: 53943; End: 55340 Strand: -

Full Sequence      

MKYLLRKLFMFVALFACTFMMAQGTLNWRDIYTVKKKDTVFSIAKRYGVTLPELMDANPE
MKLEGYTLKKGDTIFIPYHKDSSTTEKNVNQSGTTQATVPQTTQRAAASNVRQSNAIRIG
VMLPLHNNDGDGKRMVEYYRGVLMAVDQLKQNGVSVDVHAWNVPVNADIHQTLLSEGANQ
CNLIFGPLYSNQVAPLAAFCKTYGIKLVIPFSISGNEVASNPQIYQVYQSPTIVNEKTVK
AFLSRFPNAHPIFIDCKDASSDKGAFTLKLRSELDAKHIKYGLTSLVTPLEDFVKSFDRT
RQNVVILNSSRSPQLNEAVEKMDAMVAKYPGFGISLFGYTEWLMYLPYDLDKFYRYDTYI
PTTFYYNASSAKTIQLEKTYKSWFGTGMMPSGLPRFGITGYDQALFFLQGYHQYGKNFNG
VSGQSSYQPVQTPLRFEKVNNGGYQNDSFQLIHYLYNKTIESIAY

Enzyme Prediction     

No EC number prediction in MGYG000004495_01429.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01476	LysM	4.20e-10	32	77	1	43	LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
cd00118	LysM	5.37e-10	31	76	2	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257	LysM	1.24e-09	31	76	1	44	Lysin motif.
COG1388	LysM	2.08e-06	31	92	68	124	LysM repeat [Cell wall/membrane/envelope biogenesis].
cd06339	PBP1_YraM_LppC_lipoprotein-like	1.17e-05	118	226	1	103	periplasmic binding component of lipoprotein LppC, an immunodominant antigen. This subgroup includes periplasmic binding component of lipoprotein LppC, an immunodominant antigen, whose molecular function is not characterized. Members of this subgroup are predicted to be involved in transport of lipid compounds, and they are sequence similar to the family of ABC-type hydrophobic amino acid transporters (HAAT).

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUB46898.1	2.87e-178	17	465	18	451
ALO48876.1	2.11e-177	10	465	9	448
QUB71191.1	2.29e-167	14	465	11	460
QUB86322.1	8.03e-166	1	465	1	462
AKU69648.1	8.03e-166	1	465	1	462

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.012971	0.472497	0.513664	0.000265	0.000270	0.000311

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004495_01429.