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CAZyme Information: MGYG000004497_01366

You are here: Home > Sequence: MGYG000004497_01366

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp003487125
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003487125
CAZyme ID MGYG000004497_01366
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
669 73062.62 4.5652
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004497 1775671 MAG Israel Asia
Gene Location Start: 99;  End: 2108  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004497_01366.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 65 662 2.6e-55 0.7669902912621359

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.29e-04 100 436 490 796
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 0.005 299 407 1 118
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54541.1 0.0 1 669 187 855
AZH68834.1 3.76e-299 1 664 194 863
QNM10672.1 4.12e-219 1 662 188 832
AGF57028.1 3.90e-183 1 662 187 845
AZS14314.1 4.06e-158 2 662 204 872

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004497_01366.