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CAZyme Information: MGYG000004498_00867

You are here: Home > Sequence: MGYG000004498_00867

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-345 sp000433315
Lineage Bacteria; Firmicutes; Bacilli; RFN20; CAG-288; CAG-345; CAG-345 sp000433315
CAZyme ID MGYG000004498_00867
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
879 MGYG000004498_4|CGC2 98315.91 4.4979
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004498 1649118 MAG Israel Asia
Gene Location Start: 122715;  End: 125354  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004498_00867.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 225 500 1.5e-37 0.76

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.74e-12 196 462 117 399
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.41e-06 261 424 88 252
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
pfam00754 F5_F8_type_C 9.12e-06 743 867 5 121
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
PLN02793 PLN02793 4.94e-05 232 344 141 266
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACK41503.1 4.32e-106 53 730 25 679
ABX43664.1 8.95e-106 51 513 35 518
ACI19833.1 6.55e-104 53 730 25 679
QTE67472.1 1.43e-98 3 511 1 485
BCK00431.1 5.72e-96 51 513 57 520

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000066 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004498_00867.