dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000004499_00052

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Basic Information help

Species

Victivallis sp900551245

Lineage

Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp900551245

CAZyme ID

MGYG000004499_00052

CAZy Family

GH5

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
631		71481.31	5.6556

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004499	4071424	MAG	Israel	Asia

Gene Location

Start: 42751; End: 44646 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000004499_00052.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH5	79	314	2.8e-32	0.7985347985347986

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3934	COG3934	3.09e-16	4	531	7	515	Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism].
pfam08532	Glyco_hydro_42M	0.002	431	535	70	192	Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
PVY35568.1	2.02e-178	3	608	10	605
AVM43652.1	2.97e-177	3	631	19	644
QGQ98424.1	7.02e-159	3	628	15	643
AFH61205.1	1.63e-157	3	608	14	611
AFC28980.1	1.63e-157	3	608	14	611

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7BOB_A	5.14e-20	3	353	20	357	ChainA, Endo-beta-mannanase [Opitutaceae bacterium TAV5],7BOB_B Chain B, Endo-beta-mannanase [Opitutaceae bacterium TAV5],7BOB_C Chain C, Endo-beta-mannanase [Opitutaceae bacterium TAV5]
7LR1_A	3.07e-14	1	361	21	359	ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_A Chain A, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]
7LR6_A	1.68e-13	1	361	21	359	ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]
7LR7_A	7.23e-09	2	355	15	348	ChainA, Uncharacterized protein ScGH5_18 [Streptomyces cattleya NRRL 8057 = DSM 46488]
6GVB_A	2.81e-08	1	318	1	301	ChainA, exo-beta-1,4-mannosidase [Cutibacterium acnes],6GVB_B Chain B, exo-beta-1,4-mannosidase [Cutibacterium acnes],6GVB_C Chain C, exo-beta-1,4-mannosidase [Cutibacterium acnes],6GVB_D Chain D, exo-beta-1,4-mannosidase [Cutibacterium acnes]

Swiss-Prot Hits help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000066	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000004499_00052.