CAZyme Information: MGYG000004499_00397

Basic Information

• Species: Victivallis sp900551245
• Lineage: Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp900551245
• CAZyme ID: MGYG000004499_00397
• CAZy Family: GH50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
712		80394.36	9.2645

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004499	4071424	MAG	Israel	Asia

• Gene Location: Start: 146688; End: 148826 Strand: -

Full Sequence      

MKTLPSVSLLLLAFCTMLGAAEEASKPLFHFADMQTGIREMGKSHYEIKDGKLRLEVPAG
SPKWSGILLKNPDGSGFSTKGYSAVAFDVRNLGDSFSGELQVELICLGTNGKWRYRSKGG
VALRKGESFPCRVPFYRDCGGTLKDPMQRTGIYKSPDGYPGAAESQRSHQDRIDEIRIFV
NSVGWPGVEHRFELSDLRLENPVPPLNPELSNPAKFFPCIDTFGQYKHAKHRNLIHSDQE
LRESARREMQILQNRKPNPERTIYGGWANGPDFPATGHFYPLKYQGKWYLVDPTGKLFWG
HGIQGIRWVDTTPITRREHWFETLPPKDDPLYAPCWLTERSGAAWYAKTGGKLTSFNYNL
RNLIAKYGKEYPQGFIRTTALRLPAWGINLIGVNSYLPLTRDAKIPYIHNPAGKRVKLNN
GKGGFFDVFDPGYARDLKAELTGRYGFTLNDPYCIGYCIDNEVKWGTTTRFAEDVVRSPA
SQCAKKVFLEQLQKRYHNDLNAFNQAWGSDLKSWNDFLNRTALPATGRGKRDLAAFNDEI
IRTYFKVNREVLKECAPHKLYLGSRMHDNPVRVMRLAAPYLDVISLNLYRHSVADLSLPK
PLDKPVLVTEYHFGLMDGGIPAGGIQSCGSRADRKHAYSRYVESALSNPYVIGVTYFQWL
NQSAVGRYQDGENFYCGFVDVTDRPEPELVEAATELGQQLYRYRTGGVPAGN

Enzyme Prediction     

No EC number prediction in MGYG000004499_00397.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH50	81	701	6.2e-109	0.9647779479326187

CDD Domains     

MGYG000004499_00397 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM47036.1	2.15e-135	42	704	199	858
AVM44573.1	5.44e-132	53	706	212	864
AVM47039.1	3.57e-125	52	712	49	721
AWI09682.1	9.47e-124	49	706	918	1576
QEP52093.1	2.95e-123	6	712	7	709

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4BQ2_A	2.42e-68	220	706	204	748	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A	6.36e-68	220	706	204	748	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
6XJ9_A	1.75e-64	207	704	211	762	Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
5Z6P_A	1.18e-63	188	704	197	762	Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
5XB7_A	2.32e-06	387	592	75	283	GH42alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_B GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_C GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_D GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_E GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_F GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P48840	1.87e-73	59	704	274	952	Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839	1.29e-46	170	701	356	913	Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000352	0.998735	0.000383	0.000185	0.000170	0.000156

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004499_00397.