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CAZyme Information: MGYG000004499_00608

You are here: Home > Sequence: MGYG000004499_00608

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Victivallis sp900551245
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp900551245
CAZyme ID MGYG000004499_00608
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
619 70738.17 8.512
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004499 4071424 MAG Israel Asia
Gene Location Start: 14997;  End: 16856  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004499_00608.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 73 261 4.3e-30 0.5197215777262181

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01229 Glyco_hydro_39 1.23e-06 99 261 117 290
Glycosyl hydrolases family 39.
COG3693 XynA 9.88e-06 65 176 69 191
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 3.92e-210 18 614 17 615
QDU57372.1 8.15e-108 11 593 11 603
AVM44901.1 9.57e-71 10 566 7 584
AHF90941.1 1.55e-53 27 582 231 811
CCW36010.1 6.54e-36 28 247 27 252

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 3.97e-09 31 247 107 346
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000312 0.999052 0.000162 0.000157 0.000141 0.000135

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004499_00608.