dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000004499_01960

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Basic Information help

Species

Victivallis sp900551245

Lineage

Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp900551245

CAZyme ID

MGYG000004499_01960

CAZy Family

GH5

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
634		71283.68	6.0736

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004499	4071424	MAG	Israel	Asia

Gene Location

Start: 39176; End: 41080 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000004499_01960.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH5	89	324	4e-29	0.8241758241758241

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3934	COG3934	5.32e-16	11	555	4	533	Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism].
pfam02836	Glyco_hydro_2_C	1.65e-06	106	359	62	294	Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AHF94684.1	2.08e-155	26	632	1	628
AMJ67494.1	5.01e-143	5	605	19	633
SDT99127.1	3.69e-141	8	587	8	587
PVY35568.1	3.29e-140	9	632	6	632
ANE45096.1	9.30e-139	11	633	13	643

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7LR7_A	7.10e-16	14	386	17	363	ChainA, Uncharacterized protein ScGH5_18 [Streptomyces cattleya NRRL 8057 = DSM 46488]
7BOB_A	3.88e-15	14	536	21	561	ChainA, Endo-beta-mannanase [Opitutaceae bacterium TAV5],7BOB_B Chain B, Endo-beta-mannanase [Opitutaceae bacterium TAV5],7BOB_C Chain C, Endo-beta-mannanase [Opitutaceae bacterium TAV5]
7LR8_A	3.95e-15	14	386	17	363	ChainA, Uncharacterized protein ScGH5_18 [Streptomyces cattleya NRRL 8057 = DSM 46488],7LR8_B Chain B, Uncharacterized protein ScGH5_18 [Streptomyces cattleya NRRL 8057 = DSM 46488]
7LR1_A	4.81e-11	6	386	15	367	ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_A Chain A, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]
7LR6_A	2.60e-10	6	386	15	367	ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]

Swiss-Prot Hits help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000083	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000004499_01960.