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CAZyme Information: MGYG000004510_00092
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp002481295 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp002481295 | |||||||||||
| CAZyme ID | MGYG000004510_00092 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 107721; End: 109241 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 86 | 418 | 7.2e-59 | 0.9076923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.16e-33 | 47 | 338 | 73 | 401 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 6.11e-28 | 134 | 420 | 33 | 310 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02218 | PLN02218 | 5.54e-26 | 31 | 348 | 23 | 359 | polygalacturonase ADPG |
| PLN03003 | PLN03003 | 7.20e-23 | 52 | 346 | 19 | 302 | Probable polygalacturonase At3g15720 |
| PLN02793 | PLN02793 | 3.00e-19 | 156 | 351 | 150 | 346 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNT65232.1 | 7.56e-137 | 1 | 461 | 1 | 476 |
| QEC72689.1 | 9.13e-78 | 43 | 454 | 50 | 440 |
| BAV07348.1 | 2.19e-67 | 43 | 454 | 41 | 433 |
| AHF18012.1 | 2.05e-66 | 40 | 422 | 26 | 404 |
| QEC57624.1 | 3.53e-63 | 45 | 416 | 32 | 396 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1BHE_A | 4.68e-27 | 68 | 347 | 22 | 316 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 7E56_A | 3.41e-12 | 146 | 358 | 69 | 275 | ChainA, Endo-polygalacturonase [Evansstolkia leycettana] |
| 6KVE_A | 3.61e-12 | 146 | 358 | 77 | 283 | ChainA, Endo-polygalacturonase [Evansstolkia leycettana] |
| 6KVH_A | 3.61e-12 | 146 | 358 | 77 | 283 | ChainA, endo-polygalacturonase [Evansstolkia leycettana] |
| 1HG8_A | 3.78e-11 | 134 | 335 | 50 | 267 | Endopolygalacturonasefrom the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P18192 | 1.70e-27 | 65 | 347 | 42 | 342 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| P26509 | 3.69e-26 | 68 | 347 | 48 | 342 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
| Q9LW07 | 3.13e-25 | 52 | 346 | 19 | 302 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| P48978 | 5.27e-23 | 54 | 350 | 96 | 389 | Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1 |
| A7PZL3 | 4.30e-17 | 54 | 416 | 60 | 429 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000265 | 0.999013 | 0.000198 | 0.000193 | 0.000170 | 0.000144 |