logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004510_00615

You are here: Home > Sequence: MGYG000004510_00615

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp002481295
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp002481295
CAZyme ID MGYG000004510_00615
CAZy Family GH28
CAZyme Description Endo-polygalacturonase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
451 MGYG000004510_7|CGC1 49587.13 6.6021
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004510 3097673 MAG Israel Asia
Gene Location Start: 29688;  End: 31043  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004510_00615.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 47 394 3.8e-70 0.9292307692307692

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.26e-62 22 310 81 396
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02793 PLN02793 9.24e-24 25 310 54 328
Probable polygalacturonase
PLN02218 PLN02218 5.06e-21 20 310 64 343
polygalacturonase ADPG
PLN02188 PLN02188 2.49e-18 23 309 36 307
polygalacturonase/glycoside hydrolase family protein
PLN03010 PLN03010 5.83e-18 24 309 47 307
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGB27557.1 1.07e-231 1 415 1 417
ADY36938.1 2.82e-206 2 437 8 445
BCS85558.1 2.51e-205 29 435 3 410
ADE82966.1 1.49e-198 2 415 3 416
QVJ79670.1 2.12e-198 2 415 3 416

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 1.38e-29 24 335 45 390
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
1BHE_A 6.90e-21 36 391 22 361
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
3JUR_A 5.58e-20 17 304 21 343
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
2UVE_A 1.29e-16 25 231 158 405
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
4MXN_A 3.54e-15 24 253 22 235
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 7.24e-23 26 315 65 364
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q949Z1 3.15e-21 24 310 80 361
Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1
P18192 1.09e-20 36 391 48 387
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1
Q8RY29 3.46e-20 23 310 67 343
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
P26509 3.61e-20 18 391 24 387
Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000218 0.999152 0.000162 0.000160 0.000139 0.000135

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004510_00615.