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CAZyme Information: MGYG000004517_01839
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UBA5884; | |||||||||||
| CAZyme ID | MGYG000004517_01839 | |||||||||||
| CAZy Family | CBM22 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 2534; End: 4591 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 191 | 530 | 5e-96 | 0.9933993399339934 |
| CBM22 | 34 | 162 | 4.6e-29 | 0.9694656488549618 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00331 | Glyco_hydro_10 | 3.43e-106 | 192 | 530 | 1 | 310 | Glycosyl hydrolase family 10. |
| smart00633 | Glyco_10 | 7.38e-100 | 233 | 528 | 1 | 263 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 1.85e-68 | 201 | 530 | 34 | 339 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
| pfam02018 | CBM_4_9 | 8.79e-15 | 33 | 167 | 2 | 134 | Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. |
| pfam00404 | Dockerin_1 | 1.76e-07 | 627 | 682 | 1 | 56 | Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBL16579.1 | 6.15e-212 | 4 | 537 | 7 | 541 |
| CAB65753.1 | 1.62e-204 | 34 | 530 | 33 | 530 |
| CAL91979.1 | 1.50e-195 | 26 | 530 | 20 | 523 |
| CAL91978.1 | 7.39e-183 | 69 | 531 | 3 | 464 |
| ADU21885.1 | 1.89e-168 | 37 | 533 | 40 | 541 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2W5F_A | 7.83e-100 | 35 | 528 | 25 | 524 | ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2W5F_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus] |
| 2WYS_A | 3.78e-96 | 35 | 528 | 25 | 524 | ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WYS_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_A Chain A, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],2WZE_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus] |
| 6FHE_A | 1.43e-63 | 184 | 529 | 5 | 339 | Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct] |
| 6D5C_A | 3.87e-62 | 189 | 530 | 20 | 349 | Structureof Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_B Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii],6D5C_C Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii] |
| 5OFJ_A | 1.07e-61 | 188 | 530 | 7 | 337 | Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P29126 | 3.20e-105 | 191 | 525 | 629 | 946 | Bifunctional endo-1,4-beta-xylanase XylA OS=Ruminococcus flavefaciens OX=1265 GN=xynA PE=3 SV=1 |
| P51584 | 5.08e-95 | 35 | 528 | 36 | 535 | Endo-1,4-beta-xylanase Y OS=Acetivibrio thermocellus OX=1515 GN=xynY PE=1 SV=1 |
| Q60042 | 7.76e-87 | 34 | 529 | 200 | 686 | Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1 |
| Q60037 | 4.10e-86 | 34 | 529 | 205 | 690 | Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1 |
| P36917 | 9.16e-69 | 33 | 636 | 196 | 763 | Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000238 | 0.999052 | 0.000185 | 0.000184 | 0.000170 | 0.000152 |