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CAZyme Information: MGYG000004536_00087

You are here: Home > Sequence: MGYG000004536_00087

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp900542505
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900542505
CAZyme ID MGYG000004536_00087
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
445 MGYG000004536_1|CGC2 50040.68 5.7905
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004536 2335647 MAG Israel Asia
Gene Location Start: 102158;  End: 103495  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004536_00087.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 80 437 6.8e-36 0.4175531914893617

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 3.46e-27 105 435 153 488
beta-galactosidase.
COG3250 LacZ 1.68e-26 87 440 96 437
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 2.79e-24 83 440 119 481
cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam02836 Glyco_hydro_2_C 8.16e-17 288 439 2 165
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02837 Glyco_hydro_2_N 2.85e-06 57 137 49 129
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AFL78621.1 1.67e-220 11 445 1 452
BBL07145.1 1.91e-215 22 445 23 445
BBL00145.1 4.20e-214 11 445 1 453
BBL11042.1 1.20e-213 11 445 1 453
BBL08251.1 1.20e-213 11 445 1 453

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DEC_A 4.25e-33 60 445 109 496
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 8.91e-31 60 445 113 500
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
6S6Z_A 6.09e-28 81 435 117 466
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 6.09e-28 81 435 118 467
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3VD5_A 7.24e-23 89 435 165 516
E.coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_B E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_C E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD5_D E. coli (lacZ) beta-galactosidase (N460S) [Escherichia coli],3VD7_A E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_B E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_C E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD7_D E. coli (lacZ) beta-galactosidase (N460S) in complex with galactotetrazole [Escherichia coli],3VD9_A E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_B E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_C E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],3VD9_D E. coli (lacZ) beta-galactosidase (N460S) in complex with IPTG [Escherichia coli],4DUX_A E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_B E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_C E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12],4DUX_D E. coli (lacZ) beta-galactosidase (N460S) in complex with L-ribose [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O52847 3.09e-28 87 435 147 507
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q56307 3.34e-27 81 435 118 467
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
A5F5U6 3.41e-26 103 435 147 485
Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2
Q48727 3.65e-24 82 438 116 460
Beta-galactosidase OS=Lactococcus lactis subsp. lactis (strain IL1403) OX=272623 GN=lacZ PE=3 SV=3
Q6D736 6.68e-24 80 435 135 498
Beta-galactosidase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000392 0.998740 0.000280 0.000209 0.000186 0.000151

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004536_00087.