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CAZyme Information: MGYG000004547_01872

You are here: Home > Sequence: MGYG000004547_01872

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; ;
CAZyme ID MGYG000004547_01872
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1429 MGYG000004547_141|CGC1 159188.61 4.5852
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004547 2604006 MAG France Europe
Gene Location Start: 1279;  End: 5568  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.-.-.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 70 396 1.3e-71 0.9861111111111112
CE12 801 1049 1.1e-58 0.9952380952380953
CE12 1078 1292 2.4e-39 0.9904761904761905

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 4.93e-56 800 1049 1 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
COG4677 PemB 2.95e-45 78 398 93 405
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 1.40e-38 71 398 4 298
Pectinesterase.
PLN02773 PLN02773 4.48e-37 69 401 7 302
pectinesterase
PLN02682 PLN02682 7.19e-37 57 389 59 355
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QAV09174.1 4.04e-85 77 1259 519 1603
ADD61757.1 3.07e-61 791 1084 949 1261
QSI02582.1 1.12e-53 797 1050 954 1220
AUO19045.1 4.24e-49 101 392 25 292
AZA61243.1 3.50e-47 62 402 26 334

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2NSP_A 1.37e-20 65 404 4 340
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
5C1C_A 7.33e-20 69 347 11 250
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
5C1E_A 7.33e-20 69 347 11 250
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2NTB_A 7.23e-17 65 404 4 340
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]
1QJV_A 9.70e-17 65 404 4 340
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31528 1.87e-27 802 1054 5 207
Probable rhamnogalacturonan acetylesterase YesY OS=Bacillus subtilis (strain 168) OX=224308 GN=yesY PE=1 SV=1
O31523 6.95e-27 800 1054 6 217
Rhamnogalacturonan acetylesterase RhgT OS=Bacillus subtilis (strain 168) OX=224308 GN=rhgT PE=1 SV=1
O49298 2.89e-25 55 398 241 540
Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana OX=3702 GN=PME6 PE=2 SV=1
Q8VYZ3 2.38e-24 58 399 73 379
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
Q9LVQ0 2.48e-24 69 359 7 263
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.470350 0.514764 0.012499 0.001066 0.000527 0.000791

TMHMM  Annotations      download full data without filtering help

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30 52