logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004547_01911

You are here: Home > Sequence: MGYG000004547_01911

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; ;
CAZyme ID MGYG000004547_01911
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1592 174655.31 4.324
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004547 2604006 MAG France Europe
Gene Location Start: 283;  End: 5061  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004547_01911.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 98 296 9.2e-69 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 7.97e-05 2 407 1 341
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 0.003 96 296 1 186
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUO19050.1 1.17e-309 1 1497 7 1522
AUO19476.1 6.75e-99 35 532 30 491
AUO19400.1 1.70e-95 37 524 37 507
AUO19402.1 9.01e-93 42 517 32 494
QEL04270.1 1.02e-91 37 520 10 469

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 7.51e-52 40 520 20 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 5.30e-50 40 520 20 413
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297 5.56e-50 40 520 20 410
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q0CLG7 2.42e-49 40 520 20 413
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
A1DPF0 3.36e-49 40 520 21 414
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000276 0.998932 0.000220 0.000205 0.000185 0.000159

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004547_01911.