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CAZyme Information: MGYG000004549_00039

You are here: Home > Sequence: MGYG000004549_00039

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella;
CAZyme ID MGYG000004549_00039
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
720 MGYG000004549_1|CGC2 78421.1 4.7735
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004549 1876970 MAG France Europe
Gene Location Start: 43490;  End: 45652  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004549_00039.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 10 329 9.5e-81 0.9826388888888888
CE19 453 701 7.8e-26 0.6204819277108434

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 9.49e-65 26 330 99 404
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 8.74e-53 16 311 10 275
Pectinesterase.
PLN02432 PLN02432 7.16e-41 7 332 12 290
putative pectinesterase
PLN02708 PLN02708 1.54e-40 16 336 251 550
Probable pectinesterase/pectinesterase inhibitor
PLN02990 PLN02990 2.70e-39 10 337 263 562
Probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA34433.1 0.0 10 716 10 716
ATP54718.1 0.0 5 716 5 716
QUC03567.1 0.0 9 715 8 709
QIX89293.1 1.21e-100 10 336 19 348
QRP39805.1 1.93e-99 10 336 20 349

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 3.30e-30 10 310 7 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
3UW0_A 5.95e-24 10 289 35 311
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
5C1E_A 1.64e-23 15 278 16 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 3.00e-23 15 278 16 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1GQ8_A 4.29e-23 10 310 11 281
Pectinmethylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GXA1 4.07e-35 10 337 260 559
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
Q1JPL7 3.57e-30 10 310 249 519
Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana OX=3702 GN=PME18 PE=1 SV=3
O04887 5.45e-30 10 310 205 472
Pectinesterase 2 OS=Citrus sinensis OX=2711 GN=PECS-2.1 PE=2 SV=1
Q9FF78 2.91e-29 10 310 260 526
Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana OX=3702 GN=PME46 PE=2 SV=1
Q4PT34 4.47e-29 10 278 48 286
Probable pectinesterase 56 OS=Arabidopsis thaliana OX=3702 GN=PME56 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000067 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004549_00039.