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CAZyme Information: MGYG000004558_02270

You are here: Home > Sequence: MGYG000004558_02270

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter;
CAZyme ID MGYG000004558_02270
CAZy Family CBM48
CAZyme Description 1,4-alpha-glucan branching enzyme GlgB
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
641 MGYG000004558_14|CGC2 74702.68 6.6743
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004558 3542236 MAG France Europe
Gene Location Start: 48528;  End: 50453  Strand: +

Full Sequence      Download help

MKKGKSTKKK  LEPFEIGELD  QYLFGQGNHY  EIYEKMGAHK  VVYKGREGVY  FAVWAPNARR60
VAVVGDFNGW  DFEANYMERQ  EPVGIYTCFV  PGVKEGDLYK  FCIETQQGKR  IFKADPFANY120
AELRPGTASR  VTDISHLKWT  DSAWMKRRET  WDHRENPMSI  YEVHLGSWMR  HPGRDDEGFY180
TYREFADAIV  KYVKDMGYTH  VELMGMAEHP  FDGSWGYQVT  GYYAPTSRYG  TPEDFAYMID240
HLHRNNIGVI  LDWVPAHFPR  DAHGLADFDG  TPTYEYADPR  KGEHPDWGTK  IFDYGKPEVK300
NFLIANALFW  IEHYHVDGLR  VDAVASMLYL  DYGKQDGQWV  ANKYGGNENL  EAIEFFKHLN360
SVVLGRNKGA  VMIAEESTAW  PKVTGAPEDD  GLGFSLKWNM  GWMHDFTEYM  KLDPYFRKNA420
HHMMTFASSY  AYSENYILVL  SHDEVVHLKC  SMLNKMPGLG  FDKYANLKVG  YAFMTGHPGK480
KLLFMGQEFA  QLREWSEERE  LDWFLLAEPE  HQAIQNWYRD  LLHLYKKNKA  LYELDSYPEG540
FEWINADDIF  RSIYSFERHS  RDNKKNLLFV  CNFTPMERPD  YRVGVTRRKQ  LKLVLNSDEK600
KYGGKGVERP  LIYKPVKQEC  DGKKYSIAYP  LPAYGVAVFE  F641

Enzyme Prediction      help

EC 2.4.1.18

CAZyme Signature Domains help

Created with Snap326496128160192224256288320352384416448480512544576608192491GH1335119CBM48
Family Start End Evalue family coverage
GH13 192 491 1.8e-150 0.9933554817275747
CBM48 35 119 2e-16 0.881578947368421

CDD Domains      download full data without filtering help

Created with Snap32649612816019222425628832035238441644848051254457660818641PRK1231316639PRK1470516640GlgB36641PRK1470616640PRK05402
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12313 PRK12313 0.0 18 641 9 627
1,4-alpha-glucan branching protein GlgB.
PRK14705 PRK14705 0.0 16 639 603 1220
glycogen branching enzyme; Provisional
COG0296 GlgB 0.0 16 640 6 627
1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism].
PRK14706 PRK14706 0.0 36 641 27 621
glycogen branching enzyme; Provisional
PRK05402 PRK05402 0.0 16 640 100 722
1,4-alpha-glucan branching protein GlgB.

CAZyme Hits      help

Created with Snap3264961281601922242562883203523844164484805125445766081641QHB24149.1|CBM48|GH13_91641QEI31650.1|CBM48|GH13_91641QRT30382.1|CBM48|GH13_91641CBL27570.1|CBM48|GH13_99641QEK19514.1|CBM48|GH13_9
Hit ID E-Value Query Start Query End Hit Start Hit End
QHB24149.1 0.0 1 641 1 641
QEI31650.1 0.0 1 641 1 641
QRT30382.1 0.0 1 641 1 641
CBL27570.1 0.0 1 641 1 641
QEK19514.1 0.0 9 641 4 636

PDB Hits      download full data without filtering help

Created with Snap32649612816019222425628832035238441644848051254457660816405GQW_A16405GR2_A16405GR5_A16405GQZ_A16405GQU_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GQW_A 4.96e-225 1 640 109 772
Crystalstructure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQX_A Crystal structure of branching enzyme W610N mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR2_A 4.96e-225 1 640 109 772
Crystalstructure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GR4_A Crystal structure of branching enzyme L541A mutant from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]
5GR5_A 7.03e-225 1 640 109 772
Crystalstructure of branching enzyme W610A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQZ_A 9.95e-225 1 640 109 772
Crystalstructure of branching enzyme Y500A mutant from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142]
5GQU_A 1.41e-224 1 640 109 772
Crystalstructure of branching enzyme from Cyanothece sp. ATCC 51142 [Crocosphaera subtropica ATCC 51142],5GQV_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltohexaose [Crocosphaera subtropica ATCC 51142],5GQY_A Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142 in complex with maltoheptaose [Crocosphaera subtropica ATCC 51142]

Swiss-Prot Hits      download full data without filtering help

Created with Snap32649612816019222425628832035238441644848051254457660816641sp|P30539|GLGB_BUTFI16640sp|Q7NL20|GLGB_GLOVI15640sp|Q8DLB8|GLGB_THEVB16607sp|Q2JK68|GLGB_SYNJB13632sp|Q1AZ86|GLGB_RUBXD
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P30539 5.87e-307 16 641 7 632
1,4-alpha-glucan branching enzyme GlgB OS=Butyrivibrio fibrisolvens OX=831 GN=glgB PE=1 SV=1
Q7NL20 4.00e-245 16 640 103 727
1,4-alpha-glucan branching enzyme GlgB OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=glgB PE=3 SV=1
Q8DLB8 9.03e-237 15 640 105 749
1,4-alpha-glucan branching enzyme GlgB OS=Thermosynechococcus vestitus (strain IAM M-273 / NIES-2133 / BP-1) OX=197221 GN=glgB PE=3 SV=1
Q2JK68 2.32e-236 16 607 117 719
1,4-alpha-glucan branching enzyme GlgB OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=glgB PE=3 SV=1
Q1AZ86 8.78e-234 13 632 96 710
1,4-alpha-glucan branching enzyme GlgB OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129 / PRD-1) OX=266117 GN=glgB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004558_02270.