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CAZyme Information: MGYG000004559_01198

You are here: Home > Sequence: MGYG000004559_01198

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; CAG-831;
CAZyme ID MGYG000004559_01198
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
612 MGYG000004559_44|CGC1 66520.84 4.3138
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004559 2216405 MAG France Europe
Gene Location Start: 7221;  End: 9059  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004559_01198.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 201 388 1.1e-78 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00063 FN3 4.49e-07 36 119 2 92
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
smart00656 Amb_all 8.09e-07 212 380 13 175
Amb_all domain.
COG3866 PelB 2.35e-05 161 343 48 236
Pectate lyase [Carbohydrate transport and metabolism].
smart00060 FN3 4.77e-04 36 102 2 75
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
pfam00041 fn3 0.002 41 113 6 85
Fibronectin type III domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNL41084.1 4.38e-204 125 608 24 521
QRQ55767.1 2.50e-201 125 608 24 523
SCV08375.1 2.50e-201 125 608 24 523
ALJ48957.1 2.50e-201 125 608 24 523
QUT78076.1 5.02e-201 125 608 24 523

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 5.13e-48 139 607 11 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B8NQQ7 9.08e-47 150 610 22 419
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 3.31e-46 150 610 22 419
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q4WL88 4.46e-45 150 605 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2 4.46e-45 150 605 23 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000082 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004559_01198.