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CAZyme Information: MGYG000004559_01200

You are here: Home > Sequence: MGYG000004559_01200

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; CAG-831;
CAZyme ID MGYG000004559_01200
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
577 MGYG000004559_44|CGC1 64732.81 6.5007
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004559 2216405 MAG France Europe
Gene Location Start: 10319;  End: 12052  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004559_01200.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 262 562 3.3e-100 0.9895833333333334
CE12 37 247 6.5e-75 0.9952380952380953

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 8.90e-82 36 247 1 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
pfam01095 Pectinesterase 2.84e-76 262 557 1 290
Pectinesterase.
PLN02773 PLN02773 1.65e-68 265 556 9 290
pectinesterase
COG4677 PemB 3.10e-63 261 557 81 397
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02682 PLN02682 2.89e-60 261 553 69 352
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM52203.1 2.42e-171 23 576 12 578
QUT45771.1 4.03e-170 23 573 13 576
QIU94488.1 4.24e-170 8 573 4 567
ALJ43641.1 8.95e-170 23 573 12 563
QQA07818.1 8.95e-170 23 573 12 563

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 3.01e-44 264 544 6 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
1GQ8_A 6.08e-44 262 544 8 281
Pectinmethylesterase from Carrot [Daucus carota]
2NSP_A 2.39e-39 259 562 2 334
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
2NTB_A 1.67e-34 259 562 2 334
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]
1QJV_A 2.29e-34 259 562 2 334
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 2.27e-51 265 567 9 301
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q1PEC0 4.28e-47 262 571 215 512
Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana OX=3702 GN=PME42 PE=2 SV=1
Q84JX1 1.12e-46 262 571 215 512
Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana OX=3702 GN=PME19 PE=2 SV=1
Q3EAY9 2.52e-46 262 571 188 485
Probable pectinesterase 30 OS=Arabidopsis thaliana OX=3702 GN=PME30 PE=2 SV=1
Q43062 1.02e-45 262 544 208 482
Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica OX=3760 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.740199 0.257804 0.001418 0.000163 0.000143 0.000271

TMHMM  Annotations      download full data without filtering help

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13 30