CAZyme Information: MGYG000004560_01501

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UBA737
• CAZyme ID: MGYG000004560_01501
• CAZy Family: GH50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
689		79270.97	6.6802

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004560	2385116	MAG	France	Europe

• Gene Location: Start: 13848; End: 15917 Strand: -

Full Sequence      

MITKAHLKEIKIKTGVSENNSMPYNVKPVGACENERKPVIIFEIESGTGEKRWQPNDFLT
VDCMADIRATLTLEAVFFTKQELRFSISNTLVGGRHVKCCFELKYLDSSSTYPRNLPGHL
KSFAVGKPVSPDDIDRVEIRVLNAAEFKSFFLYGVSVTNQLPDLRVSGEPLADRFGQQKN
VEWKGKTHTEHELTEFLQDQYEWSKTHNSYGRDDYDKYGGWTGLKFEKRGHFYRHHDGRR
WWLVDPEGNAFFSNGICYGNRTGIYGVVDSMENLFEDLPKPNDSIFASAWTTADKIPEFV
KRNGAGAGRSKKMYNFARANMIRSFGPDKWWEAWVSINRARMKTWGFNTISVGVNNYTDE
DVLQYLKTAEIPYCVTLKDFPKTKKLLFRDFPDVFSDEYSRLCKSFCEQLRPFCGDPYFI
GYFITNEPEWMFQKDVNVAERTLAMSEDTASKIEIVNILKKKYNSVKHLNKAWNTTFKDF
DKIILTDIQTARLSDTALKELELLRDVLIDKYTAVPGKYLSEIAPNALNLGMRYSSVDDN
DFAGNNRFDIFSFNCYSGDPQNMFNKASEALNMPFIIGEWHIGSVESGLMSGALVNAVTQ
EERGKACAEYLRTAFVNTDCVGVHYFELNDQPLLGRFDGENMQIGLIDVCNRPYTECVKR
ISAMNRDMYDILCGKIVPEKIEWKYHYRY

Enzyme Prediction     

No EC number prediction in MGYG000004560_01501.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH50	120	669	7.7e-91	0.8499234303215927

CDD Domains     

MGYG000004560_01501 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AEV29398.1	3.66e-199	1	678	1	675
AEE96522.1	2.68e-133	29	682	16	660
SQI63245.1	1.22e-117	101	678	79	631
QHW33563.1	1.10e-113	103	682	108	669
AIQ57890.1	2.79e-113	40	678	37	649

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6XJ9_A	5.66e-48	171	670	222	760	Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
5Z6P_A	3.13e-42	171	669	222	759	Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
4BQ2_A	4.13e-41	134	669	166	743	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
4BQ4_A	1.00e-40	134	669	166	743	Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P48840	2.59e-40	127	669	387	949	Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839	6.21e-27	241	676	470	920	Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000054	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004560_01501.