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CAZyme Information: MGYG000004560_01684

You are here: Home > Sequence: MGYG000004560_01684

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UBA737;
CAZyme ID MGYG000004560_01684
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
647 74317.84 4.5198
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004560 2385116 MAG France Europe
Gene Location Start: 5498;  End: 7441  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004560_01684.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 208 641 7.6e-46 0.8492063492063492

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 4.83e-23 307 642 6 339
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG3408 GDB1 0.002 406 563 343 516
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBD46135.1 5.19e-194 8 641 122 750
QGY42778.1 2.38e-193 1 641 104 741
AJY74261.1 3.97e-193 8 641 93 722
QUH27875.1 4.76e-188 1 641 72 706
QTH41646.1 2.17e-187 3 641 36 668

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000073 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004560_01684.