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CAZyme Information: MGYG000004561_00548

You are here: Home > Sequence: MGYG000004561_00548

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp002480935
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp002480935
CAZyme ID MGYG000004561_00548
CAZy Family GH143
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1120 MGYG000004561_7|CGC1 127873.49 7.0212
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004561 3001921 MAG France Europe
Gene Location Start: 7767;  End: 11129  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004561_00548.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH143 23 568 6.7e-256 0.9910071942446043
GH142 631 1114 5.9e-199 0.9958246346555324

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13088 BNR_2 2.68e-07 267 341 168 247
BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases.
COG3408 GDB1 4.43e-05 746 964 348 551
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
PRK10137 PRK10137 0.003 826 950 581 712
alpha-glucosidase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCS85039.1 0.0 21 1116 16 1108
QUT58490.1 0.0 23 1116 19 1097
QEW37190.1 0.0 23 1116 19 1097
QQY37484.1 0.0 23 1116 19 1097
ABR40380.1 0.0 23 1116 19 1097

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQR_A 0.0 31 1116 30 1101
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
5MQS_A 0.0 31 1116 30 1101
SialidaseBT_1020 [Bacteroides thetaiotaomicron]
6M5A_A 4.25e-24 651 1116 304 809
Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 3.90e-23 651 1116 335 840
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000477 0.998608 0.000270 0.000249 0.000198 0.000151

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004561_00548.