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CAZyme Information: MGYG000004561_01828

You are here: Home > Sequence: MGYG000004561_01828

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp002480935
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp002480935
CAZyme ID MGYG000004561_01828
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1485 158723.25 4.7559
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004561 3001921 MAG France Europe
Gene Location Start: 206;  End: 4663  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004561_01828.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1042 1308 2.6e-43 0.84375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02488 PLN02488 3.23e-14 1024 1266 190 417
probable pectinesterase/pectinesterase inhibitor
COG4677 PemB 6.32e-14 1037 1266 89 331
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam13205 Big_5 5.84e-12 924 1020 1 106
Bacterial Ig-like domain.
PRK10531 PRK10531 3.46e-11 1040 1279 96 360
putative acyl-CoA thioester hydrolase.
pfam01095 Pectinesterase 1.31e-10 1032 1348 1 297
Pectinesterase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCD41145.1 0.0 23 1483 29 1493
QNT65238.1 0.0 385 1483 13 1131
QCD38476.1 0.0 22 1483 28 1474
QCP72166.1 0.0 22 1483 28 1474
QUT74167.1 0.0 20 1477 33 1427

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2NTB_A 4.74e-14 1037 1355 14 340
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]
1QJV_A 8.49e-14 1037 1355 14 340
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]
1XG2_A 1.71e-08 1034 1348 6 300
ChainA, Pectinesterase 1 [Solanum lycopersicum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A9 3.28e-13 1037 1355 38 364
Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1
P0C1A8 7.79e-13 1037 1355 38 364
Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1
Q9SIJ9 9.26e-12 1104 1368 91 347
Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1
Q9LUL8 1.35e-10 1096 1357 710 962
Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana OX=3702 GN=PME26 PE=2 SV=1
Q1JPL7 4.83e-10 1021 1360 235 554
Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana OX=3702 GN=PME18 PE=1 SV=3

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000602 0.998657 0.000171 0.000197 0.000175 0.000166

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004561_01828.