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CAZyme Information: MGYG000004578_00443

You are here: Home > Sequence: MGYG000004578_00443

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1795 sp900553555
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; CAG-552; UMGS1795; UMGS1795 sp900553555
CAZyme ID MGYG000004578_00443
CAZy Family GH2
CAZyme Description Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1052 119420.7 5.4832
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004578 1540237 MAG France Europe
Gene Location Start: 42078;  End: 45236  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004578_00443.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 484 932 4.1e-94 0.5026595744680851

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG0064 GatB 0.0 1 474 3 482
Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit [Translation, ribosomal structure and biogenesis].
PRK05477 gatB 0.0 1 472 2 474
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.
pfam02934 GatB_N 1.35e-148 8 286 3 283
GatB/GatE catalytic domain. This domain is found in the GatB and GatE proteins.
TIGR00133 gatB 6.63e-144 1 473 1 478
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit. The heterotrimer GatABC is responsible for transferring the NH2 group that converts Glu to Gln, or Asp to Asn after the Glu or Asp has been ligated to the tRNA for Gln or Asn, respectively. In Lactobacillus, GatABC is responsible only for tRNA(Gln). In the Archaea, GatABC is responsible only for tRNA(Asn), while GatDE is responsible for tRNA(Gln). In lineages that include Thermus, Chlamydia, or Acidithiobacillus, the GatABC complex catalyzes both. [Protein synthesis, tRNA aminoacylation]
PLN02751 PLN02751 6.94e-122 4 475 61 544
glutamyl-tRNA(Gln) amidotransferase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ANY74929.1 5.57e-195 484 1052 9 582
QNF30093.1 1.73e-194 483 1051 3 573
SMF87854.1 2.47e-193 482 1052 7 582
ANA78861.1 6.48e-193 482 1052 6 580
AVV57223.1 6.48e-193 482 1052 6 580

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3H0L_B 2.44e-112 4 474 5 477
Structureof trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0L_E Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0L_H Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0L_K Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0L_N Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0L_Q Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0L_T Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0L_W Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0M_B Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0M_E Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0M_H Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0M_K Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0M_N Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0M_Q Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0M_T Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0M_W Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0R_B Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0R_E Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0R_H Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0R_K Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0R_N Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0R_Q Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0R_T Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus],3H0R_W Structure of trna-dependent amidotransferase gatcab from aquifex aeolicus [Aquifex aeolicus]
3AL0_B 2.87e-111 8 472 7 479
Crystalstructure of the glutamine transamidosome from Thermotoga maritima in the glutamylation state. [Thermotoga maritima MSB8]
2DF4_B 5.03e-105 4 474 3 474
Structureof tRNA-Dependent Amidotransferase GatCAB complexed with Mn2+ [Staphylococcus aureus],2DQN_B Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Asn [Staphylococcus aureus],2F2A_B Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Gln [Staphylococcus aureus],2G5H_B Structure of tRNA-Dependent Amidotransferase GatCAB [Staphylococcus aureus],2G5I_B Structure of tRNA-Dependent Amidotransferase GatCAB complexed with ADP-AlF4 [Staphylococcus aureus],3IP4_B Chain B, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [Staphylococcus aureus subsp. aureus Mu50]
3KFU_F 4.42e-84 4 401 2 396
Crystalstructure of the transamidosome [Thermus thermophilus HB8],3KFU_I Crystal structure of the transamidosome [Thermus thermophilus HB8]
4WJ3_B 3.08e-74 4 387 3 390
Crystalstructure of the asparagine transamidosome from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4WJ3_E Crystal structure of the asparagine transamidosome from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4WJ3_H Crystal structure of the asparagine transamidosome from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4WJ3_K Crystal structure of the asparagine transamidosome from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B9MQ85 1.05e-129 4 474 3 479
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B OS=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) OX=521460 GN=gatB PE=3 SV=1
A4XHY9 2.89e-129 4 474 3 479
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) OX=351627 GN=gatB PE=3 SV=1
Q3AD35 1.62e-128 1 472 1 478
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=gatB PE=3 SV=1
A9KJ27 3.50e-125 1 474 1 477
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B OS=Lachnoclostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) OX=357809 GN=gatB PE=3 SV=1
B5YL60 2.71e-122 4 474 3 475
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) OX=289376 GN=gatB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999823 0.000204 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004578_00443.