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CAZyme Information: MGYG000004586_00589
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; | |||||||||||
| CAZyme ID | MGYG000004586_00589 | |||||||||||
| CAZy Family | GH48 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 12972; End: 14909 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam02011 | Glyco_hydro_48 | 1.24e-134 | 1 | 454 | 262 | 620 | Glycosyl hydrolase family 48. Members of this family are endoglucanase EC:3.2.1.4 and exoglucanase EC:3.2.1.91 enzymes that cleave cellulose or related substrate. |
| pfam02368 | Big_2 | 2.31e-11 | 467 | 524 | 5 | 69 | Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins. |
| cd14256 | Dockerin_I | 9.65e-08 | 576 | 634 | 1 | 56 | Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex. |
| COG5492 | YjdB | 5.30e-07 | 467 | 524 | 186 | 251 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| smart00635 | BID_2 | 1.30e-06 | 467 | 524 | 7 | 74 | Bacterial Ig-like domain 2. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBL17316.1 | 1.21e-140 | 1 | 464 | 323 | 727 |
| AAR01217.1 | 1.23e-133 | 1 | 478 | 313 | 794 |
| CAS03459.1 | 4.40e-132 | 1 | 478 | 318 | 801 |
| ADX05724.1 | 1.82e-131 | 1 | 468 | 314 | 744 |
| ADU23081.1 | 2.13e-126 | 1 | 457 | 319 | 779 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6D5D_A | 2.12e-89 | 1 | 449 | 280 | 637 | Structureof Caldicellulosiruptor danielii GH48 module of glycoside hydrolase WP_045175321 [Caldicellulosiruptor danielii] |
| 4EL8_A | 6.25e-89 | 1 | 449 | 269 | 626 | Theunliganded structure of C.bescii CelA GH48 module [Caldicellulosiruptor bescii DSM 6725] |
| 4L0G_A | 1.05e-88 | 1 | 449 | 273 | 630 | CrystalStructure of a GH48 cellobiohydrolase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii DSM 6725],4L6X_A Crystal Structure of a GH48 cellobiohydrolase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii DSM 6725],4TXT_A Crystal Structure of a GH48 cellobiohydrolase from Caldicellulosiruptor bescii [Caldicellulosiruptor bescii DSM 6725] |
| 5YJ6_A | 7.71e-88 | 1 | 456 | 271 | 636 | ChainA, Dockerin type I repeat-containing protein [Acetivibrio thermocellus DSM 1313] |
| 1L1Y_A | 9.37e-88 | 1 | 458 | 298 | 665 | ChainA, cellobiohydrolase [Acetivibrio thermocellus],1L1Y_B Chain B, cellobiohydrolase [Acetivibrio thermocellus],1L1Y_C Chain C, cellobiohydrolase [Acetivibrio thermocellus],1L1Y_D Chain D, cellobiohydrolase [Acetivibrio thermocellus],1L1Y_E Chain E, cellobiohydrolase [Acetivibrio thermocellus],1L1Y_F Chain F, cellobiohydrolase [Acetivibrio thermocellus],1L2A_A Chain A, cellobiohydrolase [Acetivibrio thermocellus],1L2A_B Chain B, cellobiohydrolase [Acetivibrio thermocellus],1L2A_C Chain C, cellobiohydrolase [Acetivibrio thermocellus],1L2A_D Chain D, cellobiohydrolase [Acetivibrio thermocellus],1L2A_E Chain E, cellobiohydrolase [Acetivibrio thermocellus],1L2A_F Chain F, cellobiohydrolase [Acetivibrio thermocellus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3DH67 | 2.03e-86 | 1 | 458 | 298 | 665 | Cellulose 1,4-beta-cellobiosidase (reducing end) CelS OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celS PE=1 SV=1 |
| P0C2S5 | 2.03e-86 | 1 | 458 | 298 | 665 | Cellulose 1,4-beta-cellobiosidase (reducing end) CelS OS=Acetivibrio thermocellus OX=1515 GN=celS PE=1 SV=1 |
| P50900 | 2.55e-86 | 1 | 486 | 301 | 684 | Exoglucanase-2 OS=Thermoclostridium stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) OX=1121335 GN=celY PE=1 SV=2 |
| P37698 | 1.00e-85 | 1 | 459 | 300 | 661 | Endoglucanase F OS=Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) OX=394503 GN=celCCF PE=1 SV=2 |
| P22534 | 5.42e-84 | 1 | 449 | 1377 | 1734 | Endoglucanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=celA PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000006 | 0.000040 | 0.000001 | 0.000000 | 0.000000 | 0.000000 |