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CAZyme Information: MGYG000004586_02052
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; | |||||||||||
| CAZyme ID | MGYG000004586_02052 | |||||||||||
| CAZy Family | CBM22 | |||||||||||
| CAZyme Description | Endo-1,4-beta-xylanase Y | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1975; End: 3441 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE1 | 251 | 483 | 5.5e-41 | 0.9691629955947136 |
| CBM22 | 6 | 110 | 1.8e-26 | 0.7709923664122137 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG2382 | Fes | 4.14e-24 | 236 | 488 | 62 | 299 | Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism]. |
| pfam00756 | Esterase | 1.13e-20 | 250 | 477 | 1 | 239 | Putative esterase. This family contains Esterase D. However it is not clear if all members of the family have the same function. This family is related to the pfam00135 family. |
| COG2819 | YbbA | 1.12e-15 | 243 | 398 | 1 | 171 | Predicted hydrolase of the alpha/beta superfamily [General function prediction only]. |
| pfam02018 | CBM_4_9 | 3.40e-13 | 2 | 114 | 26 | 134 | Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. |
| cd14256 | Dockerin_I | 6.83e-11 | 142 | 197 | 1 | 57 | Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CBL17231.1 | 4.70e-181 | 3 | 487 | 590 | 1074 |
| CBL17903.1 | 4.21e-172 | 1 | 486 | 467 | 954 |
| ADU21987.1 | 4.28e-122 | 4 | 486 | 763 | 1232 |
| CAB93667.1 | 1.54e-97 | 4 | 486 | 279 | 792 |
| CBL17682.1 | 5.09e-83 | 1 | 211 | 583 | 793 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5CXU_A | 1.68e-62 | 238 | 487 | 21 | 272 | Structureof the CE1 ferulic acid esterase AmCE1/Fae1A, from the anaerobic fungi Anaeromyces mucronatus in the absence of substrate [Anaeromyces mucronatus],5CXX_A Structure of a CE1 ferulic acid esterase, AmCE1/Fae1A, from Anaeromyces mucronatus in complex with Ferulic acid [Anaeromyces mucronatus],5CXX_B Structure of a CE1 ferulic acid esterase, AmCE1/Fae1A, from Anaeromyces mucronatus in complex with Ferulic acid [Anaeromyces mucronatus],5CXX_C Structure of a CE1 ferulic acid esterase, AmCE1/Fae1A, from Anaeromyces mucronatus in complex with Ferulic acid [Anaeromyces mucronatus] |
| 1H6X_A | 4.18e-46 | 1 | 133 | 30 | 162 | ChainA, Endo-1,4-beta-xylanase Y [Acetivibrio thermocellus] |
| 1H6Y_A | 3.13e-45 | 1 | 133 | 30 | 162 | ChainA, Endo-1,4-beta-xylanase Y [Acetivibrio thermocellus],1H6Y_B Chain B, Endo-1,4-beta-xylanase Y [Acetivibrio thermocellus] |
| 1DYO_A | 8.80e-45 | 1 | 131 | 30 | 160 | ChainA, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus],1DYO_B Chain B, ENDO-1,4-BETA-XYLANASE Y [Acetivibrio thermocellus] |
| 1JJF_A | 7.86e-36 | 241 | 487 | 30 | 260 | ChainA, Endo-1,4-beta-xylanase Z [Acetivibrio thermocellus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P51584 | 2.11e-63 | 1 | 391 | 588 | 973 | Endo-1,4-beta-xylanase Y OS=Acetivibrio thermocellus OX=1515 GN=xynY PE=1 SV=1 |
| P10478 | 1.73e-32 | 241 | 487 | 49 | 279 | Endo-1,4-beta-xylanase Z OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=xynZ PE=1 SV=3 |
| Q53317 | 1.69e-19 | 9 | 204 | 287 | 512 | Xylanase/beta-glucanase OS=Ruminococcus flavefaciens OX=1265 GN=xynD PE=3 SV=2 |
| D5EXZ4 | 7.21e-15 | 241 | 393 | 429 | 584 | Carbohydrate acetyl esterase/feruloyl esterase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=axe1-6A PE=1 SV=1 |
| Q9RLB8 | 4.22e-06 | 140 | 210 | 287 | 357 | Multidomain esterase OS=Ruminococcus flavefaciens OX=1265 GN=cesA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.990353 | 0.009510 | 0.000101 | 0.000019 | 0.000012 | 0.000036 |