logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004587_00259

You are here: Home > Sequence: MGYG000004587_00259

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1409 sp900553675
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UBA1409; UBA1409 sp900553675
CAZyme ID MGYG000004587_00259
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
673 MGYG000004587_2|CGC1 74547 4.5796
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004587 2560840 MAG France Europe
Gene Location Start: 50469;  End: 52490  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004587_00259.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 70 525 1.7e-143 0.9824561403508771
CBM62 546 669 3.3e-34 0.9541984732824428

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 1.50e-15 77 388 18 364
O-Glycosyl hydrolase family 30.
COG5520 XynC 8.10e-11 181 527 124 428
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam00754 F5_F8_type_C 1.89e-10 546 665 1 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU23821.1 4.06e-201 58 668 33 646
QTE67528.1 8.04e-163 56 527 29 510
CBK73885.1 6.94e-158 51 670 942 1640
AOZ97766.1 2.64e-129 1 527 1 581
ADL35667.1 5.67e-121 52 527 82 606

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2YB7_A 7.25e-14 537 668 1 137
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YB7_B Chain B, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YFU_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YFZ_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YG0_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
5G56_A 1.91e-12 525 668 684 838
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]
7O0E_A 5.47e-07 101 527 46 447
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
7NCX_AAA 1.32e-06 101 527 53 454
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0A401ETL2 4.00e-32 74 499 49 590
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1
G2Q1N4 5.90e-07 101 527 70 471
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000001 1.000071 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004587_00259.