logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004596_00184

You are here: Home > Sequence: MGYG000004596_00184

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; CAG-617;
CAZyme ID MGYG000004596_00184
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1007 MGYG000004596_4|CGC1 113407.18 6.6016
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004596 2214446 MAG France Europe
Gene Location Start: 4439;  End: 7462  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004596_00184.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 51 873 7.5e-135 0.9534574468085106

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 3.05e-96 57 863 44 868
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 3.44e-74 43 453 1 429
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK09525 lacZ 1.02e-68 56 453 54 485
beta-galactosidase.
PRK10150 PRK10150 2.74e-64 54 471 12 467
beta-D-glucuronidase; Provisional
pfam02836 Glyco_hydro_2_C 1.11e-37 299 612 1 300
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCQ34661.1 0.0 15 1007 10 1001
QCQ52405.1 0.0 15 1007 10 1001
QRM68574.1 0.0 15 1007 10 1001
QTO26092.1 0.0 15 1007 10 1001
QLK80725.1 0.0 15 1007 10 1001

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DEC_A 6.03e-64 23 902 7 911
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 1.59e-63 23 891 10 894
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
6S6Z_A 3.95e-58 55 878 39 869
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 3.97e-58 55 878 40 870
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3I3B_A 2.49e-47 56 673 53 683
ChainA, Beta-galactosidase [Escherichia coli K-12],3I3B_B Chain B, Beta-galactosidase [Escherichia coli K-12],3I3B_C Chain C, Beta-galactosidase [Escherichia coli K-12],3I3B_D Chain D, Beta-galactosidase [Escherichia coli K-12],3I3D_A Chain A, Beta-galactosidase [Escherichia coli K-12],3I3D_B Chain B, Beta-galactosidase [Escherichia coli K-12],3I3D_C Chain C, Beta-galactosidase [Escherichia coli K-12],3I3D_D Chain D, Beta-galactosidase [Escherichia coli K-12],3I3E_A Chain A, Beta-galactosidase [Escherichia coli K-12],3I3E_B Chain B, Beta-galactosidase [Escherichia coli K-12],3I3E_C Chain C, Beta-galactosidase [Escherichia coli K-12],3I3E_D Chain D, Beta-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O52847 2.23e-58 56 744 60 778
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q56307 2.17e-57 55 878 40 870
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
Q6LL68 2.26e-52 48 553 40 568
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1
A1SWB8 9.38e-51 57 608 51 626
Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1
Q6D736 2.24e-50 57 672 63 696
Beta-galactosidase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001812 0.990568 0.006659 0.000417 0.000273 0.000226

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004596_00184.