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CAZyme Information: MGYG000004598_01691

You are here: Home > Sequence: MGYG000004598_01691

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus;
CAZyme ID MGYG000004598_01691
CAZy Family CBM79
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
698 74965.51 4.0312
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004598 1864052 MAG France Europe
Gene Location Start: 289;  End: 2385  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004598_01691.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM79 455 570 3.6e-26 0.9545454545454546

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam18522 DUF5620 6.86e-21 266 425 1 119
Domain of unknown function (DUF5620). This is a domain of unknown function predicted to be a carbohydrate binding module.
pfam18522 DUF5620 4.78e-20 455 573 1 119
Domain of unknown function (DUF5620). This is a domain of unknown function predicted to be a carbohydrate binding module.
cd14256 Dockerin_I 1.41e-04 625 683 2 57
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
EWM54821.1 5.74e-148 3 679 2 638
CBL17555.1 5.23e-79 59 690 56 610
CCZ83178.1 4.94e-49 86 538 108 619
CCZ83818.1 1.97e-16 267 578 99 353
EGC04285.1 1.03e-14 615 698 507 590

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5M2S_B 4.21e-15 621 686 25 98
R.flavefaciens' third ScaB cohesin in complex with a group 1 dockerin [Ruminococcus flavefaciens FD-1]
5M2O_B 8.39e-12 625 679 29 83
R.flavefaciens' third ScaB cohesin in complex with a group 1 dockerin [Ruminococcus flavefaciens FD-1]
5N5P_B 5.65e-08 623 670 7 58
Crystalstructure of Ruminococcus flavefaciens' type III complex containing the fifth cohesin from scaffoldin B and the dockerin from scaffoldin A [Ruminococcus flavefaciens FD-1],5N5P_D Crystal structure of Ruminococcus flavefaciens' type III complex containing the fifth cohesin from scaffoldin B and the dockerin from scaffoldin A [Ruminococcus flavefaciens FD-1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q53317 3.10e-08 620 679 434 501
Xylanase/beta-glucanase OS=Ruminococcus flavefaciens OX=1265 GN=xynD PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000897 0.381438 0.616802 0.000378 0.000278 0.000191

TMHMM  Annotations      download full data without filtering help

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