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CAZyme Information: MGYG000004600_01329

You are here: Home > Sequence: MGYG000004600_01329

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-307 sp001916215
Lineage Bacteria; Firmicutes; Bacilli; Acholeplasmatales; Anaeroplasmataceae; CAG-307; CAG-307 sp001916215
CAZyme ID MGYG000004600_01329
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1207 MGYG000004600_14|CGC1 131363.59 4.5064
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004600 1943147 MAG France Europe
Gene Location Start: 24268;  End: 27891  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004600_01329.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 44 498 2.4e-107 0.976

CDD Domains      help

MGYG000004600_01329 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABX42257.1 7.91e-95 48 514 204 614
ADZ82028.1 1.73e-86 41 516 312 734
QEH67746.1 4.75e-86 41 516 390 812
AAG59609.1 2.06e-84 48 494 410 808
ADL51369.1 2.66e-82 48 494 834 1232

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 5.61e-39 41 365 11 296
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 4.07e-16 45 366 3 324
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A6 1.02e-39 41 365 36 321
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 5.11e-38 41 365 36 321
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
P22751 6.85e-31 48 366 392 643
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000041 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004600_01329.