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CAZyme Information: MGYG000004609_01408

You are here: Home > Sequence: MGYG000004609_01408

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter;
CAZyme ID MGYG000004609_01408
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
707 76541.91 4.0247
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004609 2469643 MAG France Europe
Gene Location Start: 700;  End: 2823  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004609_01408.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 274 389 8.6e-20 0.9609375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 3.73e-19 219 398 46 237
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam01832 Glucosaminidase 2.95e-13 274 338 1 75
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
smart00047 LYZ2 5.69e-08 264 386 3 135
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
NF033201 Vip_LPXTG_Lm 1.74e-05 494 703 233 413
cell invasion LPXTG protein Vip. Vip (Virulence protein), like the LPXTG-type internalins, is an LPXTG-anchored surface protein of the mammalian cell-invading pathogen Listeria monocytogenes, but absent from the related species Listeria innocua. For certain cell types, Vip is required for Listeria's ability to invade. It appears to bind the endoplasmic reticulum (ER) resident chaperone Gp96 as its receptor.
PRK10356 PRK10356 2.83e-05 292 341 155 210
protein bax.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEK17141.1 5.61e-171 1 491 1 495
AWY97555.1 2.92e-138 3 505 2 502
QOV20091.1 4.68e-136 17 488 6 477
QPS13527.1 4.21e-110 46 499 66 524
QMW73215.1 4.21e-110 46 499 66 524

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 1.31e-30 132 398 59 290
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P59205 8.75e-29 132 398 427 658
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1
P59206 1.04e-28 132 398 471 702
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000324 0.998809 0.000344 0.000168 0.000159 0.000147

TMHMM  Annotations      download full data without filtering help

start end
7 24
681 700