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CAZyme Information: MGYG000004621_01370

You are here: Home > Sequence: MGYG000004621_01370

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000004621_01370
CAZy Family PL15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
872 MGYG000004621_53|CGC1 98045.17 9.2928
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004621 2838817 MAG France Europe
Gene Location Start: 9643;  End: 12261  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004621_01370.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL15 539 693 6.5e-81 0.9807692307692307

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 0.0 31 508 2 476
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 0.001 517 706 1 165
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU94210.1 0.0 12 872 12 867
QRM98744.1 0.0 12 872 12 867
QUT78348.1 0.0 12 872 12 867
QDM11437.1 0.0 12 872 12 867
QUR44694.1 0.0 12 872 12 867

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6LJA_A 2.87e-262 16 872 16 868
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A 2.11e-259 16 872 16 868
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A 3.31e-34 86 802 53 745
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 5.54e-33 86 802 53 745
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.013766 0.913919 0.071328 0.000379 0.000291 0.000291

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004621_01370.