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CAZyme Information: MGYG000004622_00672

You are here: Home > Sequence: MGYG000004622_00672

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900316565
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900316565
CAZyme ID MGYG000004622_00672
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1144 122272.91 4.8547
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004622 2570641 MAG France Europe
Gene Location Start: 34982;  End: 38416  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004622_00672.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 74 251 2.4e-49 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00063 FN3 2.32e-12 435 519 4 93
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
pfam00041 fn3 1.32e-08 438 512 6 85
Fibronectin type III domain.
smart00060 FN3 2.35e-07 435 502 4 76
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
PRK15319 PRK15319 3.92e-05 576 1076 717 1128
fibronectin-binding autotransporter adhesin ShdA.
pfam18884 TSP3_bac 1.42e-04 382 401 1 20
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEV97716.1 1.79e-272 18 1084 26 1105
QCD38445.1 4.53e-140 24 515 28 557
QCP72135.1 7.00e-135 24 515 28 557
QUT73817.1 4.80e-132 1 590 1 626
CDJ79829.1 3.33e-128 24 423 21 416

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DPF0 3.22e-118 24 423 22 414
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 1.23e-117 24 423 22 414
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 1.23e-117 24 423 22 414
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B8NQQ7 9.16e-116 11 423 8 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 5.02e-114 11 423 8 413
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000352 0.998851 0.000200 0.000195 0.000203 0.000176

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004622_00672.