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CAZyme Information: MGYG000004622_01535

You are here: Home > Sequence: MGYG000004622_01535

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900316565
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900316565
CAZyme ID MGYG000004622_01535
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
597 65211.06 6.0727
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004622 2570641 MAG France Europe
Gene Location Start: 4256;  End: 6049  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004622_01535.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 73 276 1.1e-67 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam18884 TSP3_bac 0.002 467 488 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT67774.1 7.19e-232 19 597 1 586
AGB28243.1 4.91e-217 6 542 5 529
QCD40778.1 7.82e-217 20 597 17 598
QCP73827.1 7.82e-217 20 597 17 598
VEH16322.1 5.69e-212 17 542 22 534

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 1.00e-46 24 518 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q0CLG7 3.67e-46 16 518 14 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q2UB83 1.85e-45 24 518 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297 3.35e-43 8 520 6 413
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
A1DPF0 8.59e-43 13 518 8 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000645 0.621959 0.376634 0.000294 0.000241 0.000206

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004622_01535.