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CAZyme Information: MGYG000004640_01624
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp900551055 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900551055 | |||||||||||
| CAZyme ID | MGYG000004640_01624 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3168; End: 4391 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 60 | 276 | 2.1e-42 | 0.9405940594059405 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 1.30e-42 | 3 | 345 | 5 | 342 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 4.92e-24 | 74 | 277 | 1 | 187 | Amb_all domain. |
| pfam00544 | Pec_lyase_C | 2.04e-11 | 89 | 276 | 34 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQQ30328.1 | 1.04e-88 | 34 | 346 | 60 | 363 |
| AZA73090.1 | 1.04e-88 | 34 | 346 | 60 | 363 |
| AZA61254.1 | 1.66e-87 | 34 | 346 | 60 | 363 |
| QYR11586.1 | 2.59e-87 | 24 | 350 | 40 | 362 |
| AZA64152.1 | 2.63e-86 | 34 | 346 | 60 | 363 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3ZSC_A | 1.03e-20 | 30 | 253 | 4 | 214 | Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
| 1VBL_A | 7.51e-15 | 34 | 281 | 13 | 335 | Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
| 1PCL_A | 4.14e-14 | 34 | 276 | 10 | 276 | ChainA, PECTATE LYASE E [Dickeya chrysanthemi] |
| 3KRG_A | 4.13e-12 | 122 | 274 | 150 | 323 | ChainA, Pectate lyase [Bacillus subtilis] |
| 5AMV_A | 4.13e-12 | 122 | 274 | 150 | 323 | Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9WYR4 | 3.82e-24 | 30 | 253 | 31 | 241 | Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1 |
| B1L969 | 6.96e-24 | 30 | 253 | 29 | 239 | Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1 |
| B8NBC2 | 1.26e-22 | 1 | 257 | 1 | 240 | Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1 |
| Q2TZY0 | 1.26e-22 | 1 | 257 | 1 | 240 | Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1 |
| Q0CBV0 | 1.11e-21 | 32 | 249 | 36 | 231 | Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000219 | 0.999130 | 0.000168 | 0.000163 | 0.000158 | 0.000143 |