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CAZyme Information: MGYG000004650_00203

You are here: Home > Sequence: MGYG000004650_00203

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Odoribacter;
CAZyme ID MGYG000004650_00203
CAZy Family GH3
CAZyme Description Xylan 1,4-beta-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
255 MGYG000004650_5|CGC1 28231.31 9.3302
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004650 2976949 MAG China Asia
Gene Location Start: 3740;  End: 4507  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 58 255 6e-58 0.8148148148148148

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 3.97e-63 34 254 52 283
Probable beta-xylosidase; Provisional
COG1472 BglX 2.56e-49 50 255 47 238
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 1.67e-41 60 255 63 244
Glycosyl hydrolase family 3 N terminal domain.
PRK15098 PRK15098 1.13e-33 1 255 1 277
beta-glucosidase BglX.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUC19365.1 7.03e-108 26 254 41 269
APZ45504.1 7.03e-108 26 254 41 269
QVY67461.1 6.11e-107 26 252 23 249
AXT50211.1 2.05e-106 26 254 53 281
APZ48049.1 3.56e-106 26 255 24 253

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 4.74e-53 32 253 23 254
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 4.74e-53 32 253 23 254
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5A7M_A 1.74e-41 26 254 44 278
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
5AE6_A 1.75e-41 26 254 44 278
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
6Q7I_A 3.29e-38 34 253 52 275
GH3exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 2.33e-69 33 253 33 257
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
A1DJS5 1.98e-56 26 254 44 279
Probable exo-1,4-beta-xylosidase xlnD OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xlnD PE=3 SV=1
Q9SGZ5 2.57e-55 27 253 41 280
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
A5JTQ3 3.80e-55 34 255 64 293
Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1
Q4WFI6 5.11e-55 26 254 44 279
Probable exo-1,4-beta-xylosidase bxlB OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=bxlB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000330 0.998995 0.000186 0.000155 0.000153 0.000141

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004650_00203.