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CAZyme Information: MGYG000004676_00064

You are here: Home > Sequence: MGYG000004676_00064

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp900766005
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900766005
CAZyme ID MGYG000004676_00064
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
378 MGYG000004676_1|CGC1 42688.82 8.9626
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004676 1765238 MAG China Asia
Gene Location Start: 66778;  End: 67914  Strand: -

Full Sequence      Download help

MKYYLIVGEA  SGDLHASHLM  TALKAEDPQA  DFRFFGGDLM  AAVGGTMVKH  YKDLAYMGFV60
PVLLHLRTIF  ANMKRCKEDI  VAWQPDVVIL  VDYPGFNLHI  AQFVHAHTGI  PVFYYIAPKI120
WAWKEYRIKH  IKRDVDELFS  ILPFEVEFFE  GKHRYPIHYI  GNPTVDEVTA  FLHEHPADKT180
TFLATNGLDE  RPVIALLAGS  RKQEIKDNLP  KMLKAASAFP  DYQLVLAGAP  AISPDYYKKV240
IGDAPLKIIF  GQTYRLLQHA  DAALVTSGTA  TLETALFRVP  QVVCYHTPIG  KVISFLRRHV300
LKVRYISLVN  LIADREVVKE  LVADTMTVKN  IQSELRNILE  NGRYKSDMLA  GYEDMARRLG360
PAGAPLHAAQ  EMIRILKK378

Enzyme Prediction      help

No EC number prediction in MGYG000004676_00064.

CAZyme Signature Domains help

Created with Snap18375675941131321511701892072262452642833023213403594358GT19
Family Start End Evalue family coverage
GT19 4 358 9.8e-114 0.9858757062146892

CDD Domains      download full data without filtering help

Created with Snap18375675941131321511701892072262452642833023213403591378lpxB1378LpxB4346LpxB5373lpxB1352PRK14089
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 9.81e-108 1 378 2 377
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 4.23e-92 1 378 2 381
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 1.64e-69 4 346 2 348
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 2.38e-64 5 373 10 383
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK14089 PRK14089 4.60e-49 1 352 2 331
lipid-A-disaccharide synthase.

CAZyme Hits      help

Created with Snap18375675941131321511701892072262452642833023213403591378QNL40994.1|GT191378QIU94431.1|GT191378QRQ55697.1|GT191378SCV08301.1|GT191378QDH54418.1|GT19
Hit ID E-Value Query Start Query End Hit Start Hit End
QNL40994.1 8.27e-239 1 378 1 378
QIU94431.1 1.94e-237 1 378 1 378
QRQ55697.1 1.12e-236 1 378 1 378
SCV08301.1 1.12e-236 1 378 1 378
QDH54418.1 1.12e-236 1 378 1 378

PDB Hits      download full data without filtering help

Created with Snap183756759411313215117018920722624526428330232134035953755W8S_A53755W8N_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8S_A 9.50e-37 5 375 11 380
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]
5W8N_A 2.55e-36 5 375 11 380
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Created with Snap18375675941131321511701892072262452642833023213403592376sp|Q1D393|LPXB_MYXXD4364sp|C1F718|LPXB_ACIC52378sp|B3E4H8|LPXB_TRIL12378sp|Q39T49|LPXB_GEOMG2377sp|Q02AZ6|LPXB_SOLUE
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q1D393 3.29e-67 2 376 6 378
Lipid-A-disaccharide synthase OS=Myxococcus xanthus (strain DK1622) OX=246197 GN=lpxB PE=3 SV=1
C1F718 1.75e-60 4 364 8 376
Lipid-A-disaccharide synthase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / BCRC 80197 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161) OX=240015 GN=lpxB PE=3 SV=1
B3E4H8 8.72e-60 2 378 8 382
Lipid-A-disaccharide synthase OS=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) OX=398767 GN=lpxB PE=3 SV=1
Q39T49 7.49e-58 2 378 8 382
Lipid-A-disaccharide synthase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=lpxB PE=3 SV=1
Q02AZ6 1.37e-57 2 377 3 374
Lipid-A-disaccharide synthase OS=Solibacter usitatus (strain Ellin6076) OX=234267 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000046 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004676_00064.