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CAZyme Information: MGYG000004676_01078

You are here: Home > Sequence: MGYG000004676_01078

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp900766005
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900766005
CAZyme ID MGYG000004676_01078
CAZy Family PL15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
872 100185.53 8.929
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004676 1765238 MAG China Asia
Gene Location Start: 28578;  End: 31196  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004676_01078.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL15 533 688 5.9e-102 0.9935897435897436

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 0.0 32 501 2 474
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQR19196.1 0.0 9 872 8 871
ANU59674.1 0.0 9 872 8 871
EEX44367.1 0.0 1 872 3 874
QUT70285.1 0.0 5 872 8 873
AAO79757.1 0.0 5 872 7 872

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6LJA_A 0.0 14 872 14 868
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A 0.0 14 872 14 868
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A 2.26e-32 28 706 14 665
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 3.74e-31 28 706 14 665
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000462 0.998878 0.000212 0.000167 0.000152 0.000136

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004676_01078.