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CAZyme Information: MGYG000004676_01286
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides sp900766005 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900766005 | |||||||||||
| CAZyme ID | MGYG000004676_01286 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Beta-hexosaminidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 37786; End: 40803 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH3 | 111 | 335 | 1.5e-57 | 0.9814814814814815 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00933 | Glyco_hydro_3 | 3.36e-75 | 57 | 370 | 1 | 315 | Glycosyl hydrolase family 3 N terminal domain. |
| COG1472 | BglX | 5.68e-74 | 56 | 421 | 1 | 350 | Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]. |
| PRK03642 | PRK03642 | 8.44e-55 | 581 | 1002 | 28 | 431 | putative periplasmic esterase; Provisional |
| pfam00144 | Beta-lactamase | 1.51e-42 | 596 | 980 | 1 | 313 | Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase. |
| COG1680 | AmpC | 9.75e-41 | 559 | 979 | 2 | 367 | CubicO group peptidase, beta-lactamase class C family [Defense mechanisms]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QIU92871.1 | 0.0 | 22 | 1005 | 22 | 1005 |
| QUT79868.1 | 0.0 | 28 | 1005 | 26 | 1003 |
| QDM09839.1 | 0.0 | 28 | 1005 | 26 | 1003 |
| QGT72105.1 | 0.0 | 28 | 1005 | 26 | 1003 |
| ALJ47263.1 | 0.0 | 28 | 1005 | 26 | 1003 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6K5J_A | 1.99e-65 | 56 | 417 | 11 | 381 | Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae] |
| 3BMX_A | 2.38e-59 | 50 | 432 | 36 | 458 | Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis] |
| 3LK6_A | 6.90e-59 | 50 | 432 | 10 | 432 | ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis] |
| 4GYJ_A | 1.22e-58 | 50 | 432 | 40 | 462 | Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168] |
| 3SQL_A | 1.15e-50 | 91 | 370 | 58 | 351 | CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P40406 | 1.30e-58 | 50 | 432 | 36 | 458 | Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1 |
| Q7WUL3 | 1.20e-41 | 48 | 456 | 18 | 430 | Beta-N-acetylglucosaminidase/beta-glucosidase OS=Cellulomonas fimi OX=1708 GN=nag3 PE=1 SV=1 |
| P48823 | 4.65e-41 | 82 | 448 | 55 | 448 | Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1 |
| O05213 | 7.89e-40 | 565 | 980 | 24 | 409 | N-acetylmuramyl-L-alanine amidase OS=Bacillus subtilis (strain 168) OX=224308 GN=amiE PE=1 SV=3 |
| P77619 | 1.40e-38 | 583 | 982 | 30 | 402 | Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=yfeW PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.005263 | 0.993605 | 0.000321 | 0.000303 | 0.000240 | 0.000240 |