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CAZyme Information: MGYG000004687_00251
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Haemophilus_A parahaemolyticus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pasteurellaceae; Haemophilus_A; Haemophilus_A parahaemolyticus | |||||||||||
| CAZyme ID | MGYG000004687_00251 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 20323; End: 21486 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 8 | 368 | 2.4e-139 | 0.9915254237288136 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK00025 | lpxB | 0.0 | 8 | 368 | 4 | 359 | lipid-A-disaccharide synthase; Reviewed |
| TIGR00215 | lpxB | 5.33e-179 | 1 | 368 | 1 | 369 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| COG0763 | LpxB | 1.30e-176 | 6 | 368 | 2 | 362 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| pfam02684 | LpxB | 6.04e-167 | 8 | 368 | 1 | 362 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| PRK01021 | lpxB | 6.65e-58 | 10 | 358 | 231 | 583 | lipid-A-disaccharide synthase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QEN10472.1 | 1.82e-274 | 1 | 387 | 1 | 387 |
| QRP13459.1 | 1.82e-274 | 1 | 387 | 1 | 387 |
| AWI50872.1 | 7.80e-238 | 1 | 384 | 1 | 384 |
| ABN73115.1 | 1.22e-223 | 1 | 385 | 2 | 386 |
| QSZ37891.1 | 1.22e-223 | 1 | 385 | 2 | 386 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 3.48e-158 | 2 | 385 | 3 | 382 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 7.00e-158 | 2 | 385 | 3 | 382 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3MY79 | 2.44e-224 | 1 | 385 | 2 | 386 | Lipid-A-disaccharide synthase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) OX=416269 GN=lpxB PE=3 SV=1 |
| B3GZJ7 | 9.92e-224 | 1 | 385 | 2 | 386 | Lipid-A-disaccharide synthase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) OX=537457 GN=lpxB PE=3 SV=1 |
| B0BRG6 | 5.73e-223 | 1 | 385 | 2 | 386 | Lipid-A-disaccharide synthase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) OX=434271 GN=lpxB PE=3 SV=1 |
| Q7VMW5 | 1.27e-216 | 1 | 384 | 1 | 384 | Lipid-A-disaccharide synthase OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) OX=233412 GN=lpxB PE=3 SV=1 |
| B8F5I8 | 1.88e-215 | 1 | 387 | 1 | 387 | Lipid-A-disaccharide synthase OS=Glaesserella parasuis serovar 5 (strain SH0165) OX=557723 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000061 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |