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CAZyme Information: MGYG000004687_00360

You are here: Home > Sequence: MGYG000004687_00360

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Haemophilus_A parahaemolyticus
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pasteurellaceae; Haemophilus_A; Haemophilus_A parahaemolyticus
CAZyme ID MGYG000004687_00360
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
345 39295.11 6.5014
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004687 2063107 MAG China Asia
Gene Location Start: 9339;  End: 10376  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.52

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 49 276 8.9e-52 0.9722222222222222

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05337 PRK05337 0.0 1 338 3 337
beta-hexosaminidase; Provisional
COG1472 BglX 5.04e-108 2 291 8 293
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 5.70e-108 1 291 9 299
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QEN10489.1 4.41e-247 1 345 1 345
QRP13476.1 4.41e-247 1 345 1 345
AHG80017.1 7.54e-200 1 344 1 344
AHG73793.1 2.16e-199 1 344 1 344
VEI77948.1 6.18e-199 1 344 1 344

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4GVF_A 1.50e-113 11 342 13 339
Crystalstructure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to GlcNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVF_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to GlcNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVG_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVG_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVH_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) covalently bound to 5-fluoro-GlcNAc. [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVH_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) covalently bound to 5-fluoro-GlcNAc. [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4HZM_A Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4HZM_B Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
4GVI_A 8.56e-113 11 342 13 339
Crystalstructure of mutant (D248N) Salmonella typhimurium family 3 glycoside hydrolase (NagZ) in complex with GlcNAc-1,6-anhMurNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4GVI_B Crystal structure of mutant (D248N) Salmonella typhimurium family 3 glycoside hydrolase (NagZ) in complex with GlcNAc-1,6-anhMurNAc [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
2OXN_A 2.38e-110 11 332 13 323
Vibriocholerae family 3 glycoside hydrolase (NagZ) in complex with PUGNAc [Vibrio cholerae]
1Y65_A 2.54e-110 11 332 15 325
Crystalstructure of beta-hexosaminidase from Vibrio cholerae in complex with N-acetyl-D-glucosamine to a resolution of 1.85 [Vibrio cholerae]
3GS6_A 4.43e-108 11 332 13 323
ChainA, Beta-hexosaminidase [Vibrio cholerae],3GSM_A Chain A, Beta-hexosaminidase [Vibrio cholerae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B0BQ51 1.86e-194 1 342 1 342
Beta-hexosaminidase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) OX=434271 GN=nagZ PE=3 SV=1
A3N1B7 2.64e-194 1 342 1 342
Beta-hexosaminidase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) OX=416269 GN=nagZ PE=3 SV=1
B3GXZ7 2.64e-194 1 342 1 342
Beta-hexosaminidase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) OX=537457 GN=nagZ PE=3 SV=1
B8F5N0 9.45e-189 1 344 1 339
Beta-hexosaminidase OS=Glaesserella parasuis serovar 5 (strain SH0165) OX=557723 GN=nagZ PE=3 SV=1
Q7VNI8 2.08e-165 1 341 1 341
Beta-hexosaminidase OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) OX=233412 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000061 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004687_00360.