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CAZyme Information: MGYG000004692_00818

You are here: Home > Sequence: MGYG000004692_00818

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella aerofaciens_H
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella aerofaciens_H
CAZyme ID MGYG000004692_00818
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
812 MGYG000004692_13|CGC1 85707.85 4.6427
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004692 2399484 Isolate United States North America
Gene Location Start: 46962;  End: 49400  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004692_00818.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 496 671 1.3e-27 0.6595744680851063
CBM13 114 256 4.8e-22 0.723404255319149
CBM13 216 350 7.1e-19 0.6170212765957447
CBM13 345 454 1.6e-18 0.5319148936170213

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14200 RicinB_lectin_2 8.28e-23 296 384 2 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 1.03e-22 529 621 1 89
Ricin-type beta-trefoil lectin domain-like.
NF035929 lectin_1 5.25e-22 265 396 716 836
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.
pfam14200 RicinB_lectin_2 5.27e-21 115 190 13 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 2.74e-19 150 237 1 89
Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIA33416.1 5.01e-39 681 811 845 975
QRT49576.1 1.17e-33 103 603 423 928
QRT49575.1 9.73e-33 114 596 284 779
BAK44091.1 1.35e-22 254 604 450 803
QRT50581.1 9.38e-20 401 603 124 341

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000625 0.998514 0.000336 0.000170 0.000161 0.000152

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004692_00818.