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CAZyme Information: MGYG000004692_00820

You are here: Home > Sequence: MGYG000004692_00820

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella aerofaciens_H
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella aerofaciens_H
CAZyme ID MGYG000004692_00820
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1069 MGYG000004692_13|CGC1 113032.07 4.9814
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004692 2399484 Isolate United States North America
Gene Location Start: 50648;  End: 53857  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004692_00820.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 399 549 4.7e-20 0.6914893617021277
CBM13 780 878 1e-19 0.5053191489361702
CBM13 140 239 1.5e-19 0.5106382978723404
CBM13 673 780 1.1e-17 0.5319148936170213
CBM13 312 389 8.6e-17 0.39893617021276595

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14200 RicinB_lectin_2 9.03e-21 774 862 2 89
Ricin-type beta-trefoil lectin domain-like.
pfam13529 Peptidase_C39_2 7.47e-20 888 1041 2 138
Peptidase_C39 like family.
pfam14200 RicinB_lectin_2 8.97e-20 337 427 1 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 3.84e-18 177 265 1 89
Ricin-type beta-trefoil lectin domain-like.
NF035929 lectin_1 7.50e-18 145 276 714 835
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRT49575.1 1.78e-188 287 1069 271 1061
BAK44091.1 5.71e-77 125 879 126 885
QRT49576.1 7.96e-52 285 796 412 928
BAR06175.1 5.52e-23 455 791 552 920
QOL34941.1 2.98e-22 4 353 634 982

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5B2H_A 6.72e-08 645 777 147 278
Crystalstructure of HA33 from Clostridium botulinum serotype C strain Yoichi [Clostridium botulinum],5B2H_B Crystal structure of HA33 from Clostridium botulinum serotype C strain Yoichi [Clostridium botulinum]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000016 0.000023 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004692_00820.