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CAZyme Information: MGYG000004695_01478

You are here: Home > Sequence: MGYG000004695_01478

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900554655
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900554655
CAZyme ID MGYG000004695_01478
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
585 63598.12 4.9836
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004695 1842067 MAG Denmark Europe
Gene Location Start: 790;  End: 2547  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004695_01478.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 8 579 2.2e-55 0.7293689320388349

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 8.22e-04 130 328 579 777
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54541.1 0.0 1 585 272 855
AZH68834.1 3.34e-262 4 580 282 863
QNM10672.1 1.03e-181 4 578 271 832
AGF57028.1 1.85e-148 1 579 266 846
AZS14314.1 7.73e-133 4 579 287 873

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000022 0.000017 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004695_01478.