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CAZyme Information: MGYG000004708_00420

You are here: Home > Sequence: MGYG000004708_00420

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000004708_00420
CAZy Family PL38
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
417 MGYG000004708_20|CGC1 47297.99 9.6937
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004708 1820911 MAG China Asia
Gene Location Start: 6624;  End: 7877  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004708_00420.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL38 85 363 2e-92 0.996415770609319

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05426 Alginate_lyase 6.23e-81 84 363 1 274
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.
PRK00325 algL 8.96e-04 256 367 194 305
polysaccharide lyase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNL39956.1 4.18e-143 43 417 24 398
QIU93437.1 4.18e-143 43 413 24 394
QUT26274.1 9.66e-142 43 413 24 394
QNT66841.1 7.20e-123 20 405 4 384
AEL27539.1 1.25e-70 9 399 2 387

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3NFV_A 4.93e-54 74 415 37 381
Crystalstructure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.95 A resolution [Bacteroides ovatus ATCC 8483],3NNB_A Crystal structure of an alginate lyase (BACOVA_01668) from Bacteroides ovatus at 1.60 A resolution [Bacteroides ovatus ATCC 8483]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000345 0.998918 0.000264 0.000161 0.000148 0.000137

TMHMM  Annotations      download full data without filtering help

start end
13 35