CAZyme Information: MGYG000004708_00477

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella
• CAZyme ID: MGYG000004708_00477
• CAZy Family: GT2
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1262	MGYG000004708_24|CGC1	142625.36	5.8786

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004708	1820911	MAG	China	Asia

• Gene Location: Start: 7745; End: 11533 Strand: +

Full Sequence      

MKGTIDCFLPCNDLNAVSNTLRQLRGSRMIKNINLLVTEDFAAGCQETDNNRLLTVDSLT
SSAAMRHMAEACTADYALVFIKPVTVSLGQYAIHRMVRVAAETEAAMVFADRWSVENGEM
KAHPVIDWQEGSLRDDFDFGSVVMIKGSLLRAFAAEQDTHSYKFAGWYELWLWLSRHGRM
FHINELLYTEEERDLRASGVKQFDYVNPANREVQIEMEKAATAHLKAVGALVDTSAYADP
DFNEQDFAFEASVIIPVRNREKTICDAVDSALSQKTSFAFNVIVVDNHSTDNTTTLLQKY
AGRKDADVPLIHIIPQRKDLGIGGCWNEAVDDERCGRFAVQLDSDDLYSSPDTLQTIVDA
FYSQRAAMIVGSYRMCDFDLNTLPPGLISHAEWTDNNGCNNALRINGLGAPRAFFTPLLR
QIRFPNTSYGEDYALGLAFSRRYKIGRIFDELYLCRRWGGNSDAVLSIDKVNANNLYKDR
LRTMELIARRQLSSGKEDIISDNSLSRFFNRQMETWSLARHNFRDLQRVLTRDLNMDGWS
LTVQFNPARMVSTGAKIDKASISQRPCFLCQKNRPEEQLIKRLDENFEILVNPYPILPVH
YTIPSLCHKPQSIKENFTEIHKLLCLFSDIMVFYNGPKCGASAPDHAHFQAGSRDVTPLQ
KSWQRLTRNLSTIYSLNDDEDISLIEDWFCPALLVRSRSAESGERLFRRIYDALPMNEGD
TEPMLNIVAWRHADTFLTVVFPRRKHRPDCYSAEGDSRLLVSPGALDMSGLIITPREEDF
NKLTADRAVAVLQEVALSKDDIRGVTERIRNAGDKTSAAAGQPLDRPEPDVHVGIVSAES
IRFSLNGEYNAKGEVITGAQEVAFSEGGILWNGNIYRELTFSPCDNGASFSLQDVTIGVN
FHWERKETQTFLGTLKLVVEADKICAINILSVEKYLVSVISSEMKATSSLEFLKAHAVIS
RSWLLAQIDRRQRQGRGGNGFFSFIKKEDEVIRWYDRDDHTIFDVCADDHCQRYQGITKA
NNKHVEQAVRETCGQILMSDESICDARFSKCCGGITEEFQFCWEDNPQPYLVALHDVATP
SGHIPDLTDEAEAERWIRTSPEAYCNTQDKNILSQVLNDYDQETSDFYRWHVEYSQERIS
KLISDKLKLDLGEIIDLQPVARGKSGRIWKLKIVGTKGSFTIGKELEIRRALSDTHLYSS
AFVVDKHDISAGVPQRFVLTGAGWGHGVGLCQIGAAVMGERGCKYDHILLHYYRGAEIRK
IY

Enzyme Prediction     

No EC number prediction in MGYG000004708_00477.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT2	252	387	7.1e-19	0.7588235294117647

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16269	DUF4922	3.01e-106	616	803	1	188	Domain of unknown function (DUF4922). This family consists of uncharacterized proteins around 310 residues in length and is mainly found in various Bacteroides and Parabacteroides species. Several members are annotated as putative glycosyltransferases, but the specific function of this family is still unknown.
TIGR02669	SpoIID_LytB	4.52e-47	926	1258	2	265	SpoIID/LytB domain. This model describes a domain found typically in two or three proteins per genome in Cyanobacteria and Firmicutes, and sporadically in other genomes. One member is SpoIID of Bacillus subtilis. Another in B. subtilis is the C-terminal half of LytB, encoded immediately upstream of an amidase, the autolysin LytC, to which its N-terminus is homologous. Gene neighborhoods are not well conserved for members of this family, as many, such as SpoIID, are monocistronic. One early modelling-based study suggests a DNA-binding role for SpoIID, but the function of this domain is unknown. [Unknown function, General]
COG2385	SpoIID	7.12e-38	927	1261	139	393	Peptidoglycan hydrolase (amidase) enhancer domain [Cell wall/membrane/envelope biogenesis].
TIGR02870	spore_II_D	1.97e-34	921	1261	66	338	stage II sporulation protein D. Stage II sporulation protein D (SpoIID) is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIID, along with SpoIIM and SpoIIP, is one of three major proteins involved in engulfment of the forespore by the mother cell. [Cellular processes, Sporulation and germination]
pfam08486	SpoIID	4.36e-28	920	1038	1	100	Stage II sporulation protein. This domain is found in the stage II sporulation protein SpoIID. SpoIID is necessary for membrane migration as well as for some of the earlier steps in engulfment during bacterial endospore formation. The domain is also found in amidase enhancer proteins. Amidases, like SpoIID, are cell wall hydrolases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNT65264.1	0.0	1	1262	1	1259
BCS84357.1	0.0	1	1262	1	1252
QVJ80566.1	0.0	1	1262	1	1223
ADE82754.1	0.0	1	1262	1	1223
QYR11045.1	0.0	5	1262	4	1245

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4RWR_A	2.79e-11	915	1259	51	318	2.1Angstrom Crystal Structure of Stage II Sporulation Protein D from Bacillus anthracis [Bacillus anthracis],4RWR_B 2.1 Angstrom Crystal Structure of Stage II Sporulation Protein D from Bacillus anthracis [Bacillus anthracis]
5TZE_C	9.19e-06	252	522	4	260	Crystalstructure of S. aureus TarS in complex with UDP-GlcNAc [Staphylococcus aureus],5TZE_E Crystal structure of S. aureus TarS in complex with UDP-GlcNAc [Staphylococcus aureus],5TZI_C Crystal structure of S. aureus TarS 1-349 [Staphylococcus aureus],5TZJ_A Crystal structure of S. aureus TarS 1-349 in complex with UDP-GlcNAc [Staphylococcus aureus],5TZJ_C Crystal structure of S. aureus TarS 1-349 in complex with UDP-GlcNAc [Staphylococcus aureus],5TZK_C Crystal structure of S. aureus TarS 1-349 in complex with UDP [Staphylococcus aureus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q02113	8.25e-10	939	1258	425	702	Amidase enhancer OS=Bacillus subtilis (strain 168) OX=224308 GN=lytB PE=1 SV=1
C0QYX7	4.47e-08	911	1258	88	351	Uncharacterized protein BHWA1_00569 OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) OX=565034 GN=BHWA1_00569 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000075	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004708_00477.