Species | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; | |||||||||||
CAZyme ID | MGYG000004708_01183 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | Exo-poly-alpha-D-galacturonosidase | |||||||||||
CAZyme Property |
|
|||||||||||
Genome Property |
|
|||||||||||
Gene Location | Start: 1845; End: 3263 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 74 | 451 | 1.1e-72 | 0.9230769230769231 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 4.09e-69 | 37 | 439 | 73 | 471 | Polygalacturonase [Carbohydrate transport and metabolism]. |
pfam00295 | Glyco_hydro_28 | 2.53e-24 | 80 | 450 | 8 | 308 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN02218 | PLN02218 | 5.38e-17 | 46 | 425 | 67 | 384 | polygalacturonase ADPG |
PLN03003 | PLN03003 | 1.09e-16 | 44 | 429 | 21 | 337 | Probable polygalacturonase At3g15720 |
PLN02793 | PLN02793 | 2.12e-16 | 32 | 397 | 35 | 356 | Probable polygalacturonase |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QNT65212.1 | 2.33e-207 | 6 | 472 | 9 | 467 |
BCS86062.1 | 8.58e-197 | 22 | 470 | 8 | 450 |
AGB29865.1 | 1.89e-183 | 1 | 454 | 1 | 450 |
QCD38368.1 | 4.78e-171 | 1 | 468 | 1 | 466 |
QCP72058.1 | 4.78e-171 | 1 | 468 | 1 | 466 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3JUR_A | 7.24e-58 | 37 | 443 | 18 | 408 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
2UVE_A | 2.45e-36 | 16 | 420 | 130 | 532 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
5OLP_A | 6.43e-35 | 27 | 463 | 21 | 447 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
4MXN_A | 3.49e-18 | 49 | 308 | 24 | 234 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
A7PZL3 | 8.33e-38 | 10 | 452 | 26 | 431 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
P15922 | 5.04e-36 | 38 | 420 | 144 | 525 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
P48978 | 4.10e-17 | 37 | 397 | 89 | 400 | Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1 |
P58598 | 7.09e-17 | 88 | 388 | 103 | 408 | Polygalacturonase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=pglA PE=3 SV=1 |
P20041 | 1.67e-16 | 13 | 388 | 7 | 406 | Polygalacturonase OS=Ralstonia solanacearum OX=305 GN=pglA PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000242 | 0.999078 | 0.000181 | 0.000169 | 0.000161 | 0.000145 |
Copyright 2022 © YIN LAB, UNL. All rights reserved. Designed by Jinfang Zheng and Boyang Hu. Maintained by Yanbin Yin.